#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS3
FINGERPRINT = 59
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  27
S1_NAME_ID3 = 35
S1_NUM_ID5_ORIG =  27
S1_NUM_ID3_ORIG = 35
S1_NAME2_ID5 =  29
S1_NAME2_ID3 = 33
S1_NUM2_ID5_ORIG =  29
S1_NUM2_ID3_ORIG = 33
S1_SQ2 = GAUAU
S1_SQLEN2 = 5
S1_SQ = GAGAUAUCA
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  4
S2_NAME_ID3 = 9
S2_NUM_ID5_ORIG =  4
S2_NUM_ID3_ORIG = 9
S2_NAME2_ID5 =  6
S2_NAME2_ID3 = 7
S2_NUM2_ID5_ORIG =  6
S2_NUM2_ID3_ORIG = 7
S2_SQ2 = AC
S2_SQLEN2 = 2
S2_SQ = UGACUC
S2_SQLEN = 6
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 29
H1_OUTID2_ORIG = 7
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 54.87542669341195
H1_P_Y = 3.433219949099774
H1_P_Z = 3.2051946556967286
# Orientation:
H1_DX_X = 0.4036858072422831
H1_DX_Y = -0.26475871287145036
H1_DX_Z = 0.8757514447546191
H1_DY_X = -0.18731867808218539
H1_DY_Y = 0.9130164071876186
H1_DY_Z = 0.3623710157390523
H1_DZ_X = -0.8955163213882216
H1_DZ_Y = -0.31032863896982477
H1_DZ_Z = 0.31897751325516044
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 6
H2_OUTID2_ORIG = 33
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 68.28938866260863
H2_P_Y = -13.819714820066181
H2_P_Z = 1.0234161319785051
# Orientation:
H2_DX_X = -0.8732480143123809
H2_DX_Y = 0.28659605744796934
H2_DX_Z = 0.3940819779624216
H2_DY_X = -0.47025828013447324
H2_DY_Y = -0.28380425700012957
H2_DY_Z = -0.8356508204229574
H2_DZ_X = -0.12765208758361268
H2_DZ_Y = -0.9150507327814577
H2_DZ_Z = 0.3826056729475691
#############  END of Description of junction: j1