############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS3 FINGERPRINT = 52 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 8 S1_NAME_ID3 = 16 S1_NUM_ID5_ORIG = 8 S1_NUM_ID3_ORIG = 16 S1_NAME2_ID5 = 10 S1_NAME2_ID3 = 14 S1_NUM2_ID5_ORIG = 10 S1_NUM2_ID3_ORIG = 14 S1_SQ2 = CAGAG S1_SQLEN2 = 5 S1_SQ = UCCAGAGGU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 23 S2_NAME_ID3 = 28 S2_NUM_ID5_ORIG = 23 S2_NUM_ID3_ORIG = 28 S2_NAME2_ID5 = 25 S2_NAME2_ID3 = 26 S2_NUM2_ID5_ORIG = 25 S2_NUM2_ID3_ORIG = 26 S2_SQ2 = CG S2_SQLEN2 = 2 S2_SQ = ACCGGA S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 10 H1_OUTID2_ORIG = 26 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 61.288913437875394 H1_P_Y = 5.791949112125906 H1_P_Z = 0.9861133513780622 # Orientation: H1_DX_X = -0.004514275302724968 H1_DX_Y = 0.6489910771548315 H1_DX_Z = 0.7607826253877663 H1_DY_X = 0.4302798098468088 H1_DY_Y = -0.6854998835835362 H1_DY_Z = 0.5873237564113618 H1_DZ_X = 0.9026842784477225 H1_DZ_Y = 0.3300007445148738 H1_DZ_Z = -0.27615322207597526 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 25 H2_OUTID2_ORIG = 14 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 53.303576585240315 H2_P_Y = 25.932299829632697 H2_P_Z = 2.673145979640097 # Orientation: H2_DX_X = 0.7648452335478453 H2_DX_Y = -0.6126777258134837 H2_DX_Z = 0.1990923730612426 H2_DY_X = 0.38062608846662016 H2_DY_Y = 0.18044156574521253 H2_DY_Z = -0.9069534839946409 H2_DZ_X = 0.519745658469347 H2_DZ_Y = 0.7694588004847525 H2_DZ_Z = 0.37121099776114974 ############# END of Description of junction: j2