#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS2HS4
FINGERPRINT = 124
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  25
S1_NAME_ID3 = 34
S1_NUM_ID5_ORIG =  25
S1_NUM_ID3_ORIG = 34
S1_NAME2_ID5 =  27
S1_NAME2_ID3 = 32
S1_NUM2_ID5_ORIG =  27
S1_NUM2_ID3_ORIG = 32
S1_SQ2 = AUAUUA
S1_SQLEN2 = 6
S1_SQ = GUAUAUUACG
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  5
S2_NAME_ID3 = 12
S2_NUM_ID5_ORIG =  5
S2_NUM_ID3_ORIG = 12
S2_NAME2_ID5 =  7
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  7
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = GAAA
S2_SQLEN2 = 4
S2_SQ = CAGAAACA
S2_SQLEN = 8
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 27
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 4.156184518671278
H1_P_Y = 13.799191440644663
H1_P_Z = -2.047791443691119
# Orientation:
H1_DX_X = -0.5391117760547433
H1_DX_Y = 0.10820781805094981
H1_DX_Z = -0.835254189472733
H1_DY_X = -0.6828035853060577
H1_DY_Y = 0.5244504647797257
H1_DY_Z = 0.5086560467403509
H1_DZ_X = 0.4930900088343835
H1_DZ_Y = 0.844537019973064
H1_DZ_Z = -0.20885273539679927
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 7
H2_OUTID2_ORIG = 32
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -0.7512249244821019
H2_P_Y = -18.217848227759895
H2_P_Z = -4.008649929833675
# Orientation:
H2_DX_X = 0.5979393359134353
H2_DX_Y = 0.4658277862653506
H2_DX_Z = -0.6522829325611106
H2_DY_X = 0.7958792245756375
H2_DY_Y = -0.44160367074534435
H2_DY_Z = 0.4142009872913368
H2_DZ_X = -0.09510420840467904
H2_DZ_Y = -0.7668054978463346
H2_DZ_Z = -0.6347948629410602
#############  END of Description of junction: j1