############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS2 FINGERPRINT = 115 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 9 S1_NAME_ID3 = 14 S1_NUM_ID5_ORIG = 9 S1_NUM_ID3_ORIG = 14 S1_NAME2_ID5 = 10 S1_NAME2_ID3 = 13 S1_NUM2_ID5_ORIG = 10 S1_NUM2_ID3_ORIG = 13 S1_SQ2 = GCGC S1_SQLEN2 = 4 S1_SQ = AGCGCG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 11 S2_NAME_ID3 = 16 S2_NUM_ID5_ORIG = 11 S2_NUM_ID3_ORIG = 16 S2_NAME2_ID5 = 12 S2_NAME2_ID3 = 15 S2_NUM2_ID5_ORIG = 12 S2_NUM2_ID3_ORIG = 15 S2_SQ2 = GCGC S2_SQLEN2 = 4 S2_SQ = CGCGCA S2_SQLEN = 6 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 10 H1_OUTID2_ORIG = 15 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = B # Position: H1_P_X = -10.241431923883091 H1_P_Y = 13.249671005937401 H1_P_Z = -27.21129508525816 # Orientation: H1_DX_X = -0.20324946796055166 H1_DX_Y = 0.32824236187731337 H1_DX_Z = -0.9224676718687519 H1_DY_X = 0.5461381223225672 H1_DY_Y = -0.7439536140024412 H1_DY_Z = -0.3850534658442726 H1_DZ_X = -0.8126640173649466 H1_DZ_Y = -0.5820566742868838 H1_DZ_Z = -0.028057490949073838 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 12 H2_OUTID2_ORIG = 13 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = A # Position: H2_P_X = 0.7605392103098252 H2_P_Y = 17.039601725127852 H2_P_Z = -26.638282875870978 # Orientation: H2_DX_X = 0.45792132435797317 H2_DX_Y = 0.8547101504585726 H2_DX_Z = 0.24449666541963566 H2_DY_X = -0.1932683315561996 H2_DY_Y = -0.17273492911404986 H2_DY_Z = 0.9658208924440643 H2_DZ_X = 0.8677300344667818 H2_DZ_Y = -0.4895234447572925 H2_DZ_Z = 0.08608939724049236 ############# END of Description of junction: j2