############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 142 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 7 S1_NAME_ID3 = 15 S1_NUM_ID5_ORIG = 7 S1_NUM_ID3_ORIG = 15 S1_NAME2_ID5 = 9 S1_NAME2_ID3 = 13 S1_NUM2_ID5_ORIG = 9 S1_NUM2_ID3_ORIG = 13 S1_SQ2 = GUGUA S1_SQLEN2 = 5 S1_SQ = UCGUGUAGC S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 22 S2_NAME_ID3 = 28 S2_NUM_ID5_ORIG = 22 S2_NUM_ID3_ORIG = 28 S2_NAME2_ID5 = 24 S2_NAME2_ID3 = 26 S2_NUM2_ID5_ORIG = 24 S2_NUM2_ID3_ORIG = 26 S2_SQ2 = UCC S2_SQLEN2 = 3 S2_SQ = GCUCCGA S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 9 H1_OUTID2_ORIG = 26 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 16.386041871855845 H1_P_Y = -0.26937077993243363 H1_P_Z = 3.0498045726519902 # Orientation: H1_DX_X = 0.10848168115774115 H1_DX_Y = -0.5983729237289265 H1_DX_Z = -0.7938397627993239 H1_DY_X = 0.5217856132884293 H1_DY_Y = 0.7139810358215751 H1_DY_Z = -0.46687348848737686 H1_DZ_X = 0.8461509904375291 H1_DZ_Y = -0.36356694656589306 H1_DZ_Z = 0.3896762460637566 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 24 H2_OUTID2_ORIG = 13 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -3.5931927904573175 H2_P_Y = 4.959374996919948 H2_P_Z = 1.1654497354180062 # Orientation: H2_DX_X = 0.13075303374327873 H2_DX_Y = -0.3961486404672687 H2_DX_Z = 0.9088288611300057 H2_DY_X = 0.3631652356321222 H2_DY_Y = 0.8721199386795142 H2_DY_Z = 0.32789910671715194 H2_DZ_X = -0.9225045559753049 H2_DZ_Y = 0.2871812445365727 H2_DZ_Z = 0.2578997421309892 ############# END of Description of junction: j1