############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS3HS5 FINGERPRINT = 63:118:152 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 68 S1_NAME_ID3 = 78 S1_NUM_ID5_ORIG = 68 S1_NUM_ID3_ORIG = 78 S1_NAME2_ID5 = 70 S1_NAME2_ID3 = 76 S1_NUM2_ID5_ORIG = 70 S1_NUM2_ID3_ORIG = 76 S1_SQ2 = GAUAAGC S1_SQLEN2 = 7 S1_SQ = GCGAUAAGCGU S1_SQLEN = 11 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 54 S2_NAME_ID3 = 59 S2_NUM_ID5_ORIG = 54 S2_NUM_ID3_ORIG = 59 S2_NAME2_ID5 = 56 S2_NAME2_ID3 = 57 S2_NUM2_ID5_ORIG = 56 S2_NUM2_ID3_ORIG = 57 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 108 S3_NAME_ID3 = 116 S3_NUM_ID5_ORIG = 108 S3_NUM_ID3_ORIG = 116 S3_NAME2_ID5 = 110 S3_NAME2_ID3 = 114 S3_NUM2_ID5_ORIG = 110 S3_NUM2_ID3_ORIG = 114 S3_SQ2 = GAUUU S3_SQLEN2 = 5 S3_SQ = GCGAUUUCC S3_SQLEN = 9 S3_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 70 H1_OUTID2_ORIG = 57 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 119.67586022744999 H1_P_Y = -37.36780882977071 H1_P_Z = -46.367631759627855 # Orientation: H1_DX_X = -0.1152919310306828 H1_DX_Y = 0.4660480736890733 H1_DX_Z = 0.8772154602205333 H1_DY_X = 0.15269123311338717 H1_DY_Y = -0.864293772895941 H1_DY_Z = 0.4792511465438807 H1_DZ_X = 0.9815259334167052 H1_DZ_Y = 0.18919690046089954 H1_DZ_Z = 0.028484642993269915 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 110 H2_OUTID2_ORIG = 76 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 97.99831505875547 H2_P_Y = -51.20264647670756 H2_P_Z = -38.139830645118415 # Orientation: H2_DX_X = -0.7032027582028206 H2_DX_Y = -0.6509511019619367 H2_DX_Z = 0.2859519954651262 H2_DY_X = 0.5459043481798602 H2_DY_Y = -0.7520062858454679 H2_DY_Z = -0.3694252139299934 H2_DZ_X = 0.4555154481400763 H2_DZ_Y = -0.10367839169011717 H2_DZ_Z = 0.8841699314058857 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 56 H3_OUTID2_ORIG = 114 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = 96.89429183655896 H3_P_Y = -35.93176708833682 H3_P_Z = -48.996061078038714 # Orientation: H3_DX_X = 0.2840967491849966 H3_DX_Y = 0.9140871408325282 H3_DX_Z = 0.2893678214092503 H3_DY_X = 0.08724272860050064 H3_DY_Y = 0.2759063267485544 H3_DY_Z = -0.9572170104874118 H3_DZ_X = -0.954818172956962 H3_DZ_Y = 0.29718747925297606 H3_DZ_Z = -0.0013633658360205914 ############# END of Description of junction: j1