############# Start of Description of junction: j56 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS14HS12HS4 FINGERPRINT = 57:77:94:124:127:149 LOOP_LENGTH_SUM = 30 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1705 S1_NAME_ID3 = 1708 S1_NUM_ID5_ORIG = 1705 S1_NUM_ID3_ORIG = 1708 S1_NAME2_ID5 = 1706 S1_NAME2_ID3 = 1707 S1_NUM2_ID5_ORIG = 1706 S1_NUM2_ID3_ORIG = 1707 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = ACGC S1_SQLEN = 4 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 1666 S2_NAME_ID3 = 1683 S2_NUM_ID5_ORIG = 1666 S2_NUM_ID3_ORIG = 1683 S2_NAME2_ID5 = 1667 S2_NAME2_ID3 = 1682 S2_NUM2_ID5_ORIG = 1667 S2_NUM2_ID3_ORIG = 1682 S2_SQ2 = GAACUAGGCAAAAUGG S2_SQLEN2 = 16 S2_SQ = GGAACUAGGCAAAAUGGU S2_SQLEN = 18 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 1750 S3_NAME_ID3 = 1765 S3_NUM_ID5_ORIG = 1750 S3_NUM_ID3_ORIG = 1765 S3_NAME2_ID5 = 1751 S3_NAME2_ID3 = 1764 S3_NUM2_ID5_ORIG = 1751 S3_NUM2_ID3_ORIG = 1764 S3_SQ2 = UCGAAGAUACCAGC S3_SQLEN2 = 14 S3_SQ = GUCGAAGAUACCAGCU S3_SQLEN = 16 S3_CHAR = B ## Properties of strand 4 S4_NAME_ID5 = 1987 S4_NAME_ID3 = 1994 S4_NUM_ID5_ORIG = 1987 S4_NUM_ID3_ORIG = 1994 S4_NAME2_ID5 = 1988 S4_NAME2_ID3 = 1993 S4_NUM2_ID5_ORIG = 1988 S4_NUM2_ID3_ORIG = 1993 S4_SQ2 = GGCUGU S4_SQLEN2 = 6 S4_SQ = AGGCUGUC S4_SQLEN = 8 S4_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 18 H1_INID2 = 2 H1_OUTID2 = 17 H1_INID2_ORIG = 1706 H1_OUTID2_ORIG = 1682 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = -9.853417216846632 H1_P_Y = -78.87072106707137 H1_P_Z = 20.79881076131602 # Orientation: H1_DX_X = -0.6491759109137547 H1_DX_Y = -0.5949107772834168 H1_DX_Z = 0.47397447585428765 H1_DY_X = 0.5206848597526612 H1_DY_Y = -0.801808710528988 H1_DY_Z = -0.2932406324917842 H1_DZ_X = 0.5544888759151512 H1_DZ_Y = 0.056426578771748837 H1_DZ_Z = 0.8302759346714019 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1751 H2_OUTID2_ORIG = 1707 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = -10.847334258007592 H2_P_Y = -83.46778859067003 H2_P_Z = 5.81411545048798 # Orientation: H2_DX_X = -0.9892462762780507 H2_DX_Y = 0.06843192548757315 H2_DX_Z = 0.12926281926397643 H2_DY_X = 0.013566710022800521 H2_DY_Y = 0.922914292351976 H2_DY_Z = -0.38476636203237913 H2_DZ_X = -0.14562880638515807 H2_DZ_Y = -0.37887501969190396 H2_DZ_Z = -0.9139179231223649 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 16 H3_INID2 = 2 H3_OUTID2 = 15 H3_INID2_ORIG = 1988 H3_OUTID2_ORIG = 1764 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = -10.153479848038941 H3_P_Y = -55.3561365318448 H3_P_Z = 13.296495413455295 # Orientation: H3_DX_X = 0.6876971199693447 H3_DX_Y = -0.11310993980576001 H3_DX_Z = -0.7171323536858498 H3_DY_X = -0.6060462292206381 H3_DY_Y = -0.6333050261238924 H3_DY_Z = -0.4812823619598525 H3_DZ_X = -0.39972570499445403 H3_DZ_Y = 0.7655918530152661 H3_DZ_Z = -0.5040718950341709 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 8 H4_INID2 = 2 H4_OUTID2 = 7 H4_INID2_ORIG = 1667 H4_OUTID2_ORIG = 1993 H4_INSEQ_CHAR = B H4_OUTSEQ_CHAR = B # Position: H4_P_X = 19.675781136228743 H4_P_Y = -65.40252596199682 H4_P_Z = 10.429710827434986 # Orientation: H4_DX_X = -0.1840750173191985 H4_DX_Y = -0.7852342194994151 H4_DX_Z = 0.5912052169306978 H4_DY_X = -0.11973449227835786 H4_DY_Y = -0.5790901709060563 H4_DY_Z = -0.8064231056454432 H4_DZ_X = 0.9755921480607448 H4_DZ_Y = -0.21923000361979916 H4_DZ_Z = 0.012576412647556268 ############# END of Description of junction: j56