#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS3HS5
FINGERPRINT = 166
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  103
S1_NAME_ID3 = 111
S1_NUM_ID5_ORIG =  103
S1_NUM_ID3_ORIG = 111
S1_NAME2_ID5 =  105
S1_NAME2_ID3 = 109
S1_NUM2_ID5_ORIG =  105
S1_NUM2_ID3_ORIG = 109
S1_SQ2 = GGCGC
S1_SQLEN2 = 5
S1_SQ = UGGGCGCAG
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  118
S2_NAME_ID3 = 128
S2_NUM_ID5_ORIG =  118
S2_NUM_ID3_ORIG = 128
S2_NAME2_ID5 =  120
S2_NAME2_ID3 = 126
S2_NUM2_ID5_ORIG =  120
S2_NUM2_ID3_ORIG = 126
S2_SQ2 = GACGGUA
S2_SQLEN2 = 7
S2_SQ = CUGACGGUACA
S2_SQLEN = 11
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 11
H1_INID2 = 3
H1_OUTID2 = 9
H1_INID2_ORIG = 105
H1_OUTID2_ORIG = 126
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 6.667786379841942
H1_P_Y = -10.842561580546597
H1_P_Z = -24.820607533661573
# Orientation:
H1_DX_X = 0.968055107343682
H1_DX_Y = 0.06791793917648903
H1_DX_Z = 0.2413637559449029
H1_DY_X = -0.06906700857462234
H1_DY_Y = -0.853145495426288
H1_DY_Z = 0.5170807596114813
H1_DZ_X = 0.24103746072418986
H1_DZ_Y = -0.5172329428524929
H1_DZ_Z = -0.8212009652672023
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 120
H2_OUTID2_ORIG = 109
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 0.9332601690189315
H2_P_Y = -0.6934838161736723
H2_P_Z = -1.581692800303232
# Orientation:
H2_DX_X = -0.9244201714079782
H2_DX_Y = 0.11310950288821375
H2_DX_Z = -0.3642164014022784
H2_DY_X = -0.21115172936691085
H2_DY_Y = -0.9470713976909249
H2_DY_Z = 0.24180718529671763
H2_DZ_X = -0.31758824581430467
H2_DZ_Y = 0.30043636269955654
H2_DZ_Z = 0.8993751709317159
#############  END of Description of junction: j1