############# Start of Description of junction: j53 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS6HS2 FINGERPRINT = 22:48:60:148:151:156 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1945 S1_NAME_ID3 = 1948 S1_NUM_ID5_ORIG = 1945 S1_NUM_ID3_ORIG = 1948 S1_NAME2_ID5 = 1946 S1_NAME2_ID3 = 1947 S1_NUM2_ID5_ORIG = 1946 S1_NUM2_ID3_ORIG = 1947 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGG S1_SQLEN = 4 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1888 S2_NAME_ID3 = 1892 S2_NUM_ID5_ORIG = 1888 S2_NUM_ID3_ORIG = 1892 S2_NAME2_ID5 = 1889 S2_NAME2_ID3 = 1891 S2_NUM2_ID5_ORIG = 1889 S2_NUM2_ID3_ORIG = 1891 S2_SQ2 = CUG S2_SQLEN2 = 3 S2_SQ = CCUGC S2_SQLEN = 5 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1964 S3_NAME_ID3 = 1973 S3_NUM_ID5_ORIG = 1964 S3_NUM_ID3_ORIG = 1973 S3_NAME2_ID5 = 1965 S3_NAME2_ID3 = 1972 S3_NUM2_ID5_ORIG = 1965 S3_NUM2_ID3_ORIG = 1972 S3_SQ2 = CUUAAGGU S3_SQLEN2 = 8 S3_SQ = UCUUAAGGUA S3_SQLEN = 10 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2009 S4_NAME_ID3 = 2014 S4_NUM_ID5_ORIG = 2009 S4_NUM_ID3_ORIG = 2014 S4_NAME2_ID5 = 2010 S4_NAME2_ID3 = 2013 S4_NUM2_ID5_ORIG = 2010 S4_NUM2_ID3_ORIG = 2013 S4_SQ2 = AAUG S4_SQLEN2 = 4 S4_SQ = GAAUGG S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1946 H1_OUTID2_ORIG = 1891 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 114.98940518483937 H1_P_Y = 113.15997292564697 H1_P_Z = 88.50585959968286 # Orientation: H1_DX_X = 0.7059024269487821 H1_DX_Y = -0.49929041086491566 H1_DX_Z = 0.5024050649089418 H1_DY_X = -0.5782466255858907 H1_DY_Y = -0.8158603320018329 H1_DY_Z = 0.0016609227508297408 H1_DZ_X = 0.4090630802533326 H1_DZ_Y = -0.29168648286163545 H1_DZ_Z = -0.8646307836813776 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1965 H2_OUTID2_ORIG = 1947 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 116.87319666356993 H2_P_Y = 98.82865216186663 H2_P_Z = 103.76105793588646 # Orientation: H2_DX_X = -0.9893836791441686 H2_DX_Y = -0.14179305970506562 H2_DX_Z = 0.031853785687857794 H2_DY_X = 0.1438892826001421 H2_DY_Y = -0.9865298095603237 H2_DY_Z = 0.07781265450880426 H2_DZ_X = 0.02039141476183204 H2_DZ_Y = 0.08156998877262822 H2_DZ_Z = 0.9964589942068045 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 2010 H3_OUTID2_ORIG = 1972 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.39307591335296 H3_P_Y = 112.47084837040356 H3_P_Z = 105.18276124883835 # Orientation: H3_DX_X = 0.8761399668584886 H3_DX_Y = 0.44036925264869353 H3_DX_Z = -0.19609609836717823 H3_DY_X = -0.4814103448788103 H3_DY_Y = 0.7782392833338179 H3_DY_Z = -0.40322164837682806 H3_DZ_X = -0.024956728889662827 H3_DZ_Y = 0.44768129198983786 H3_DZ_Z = 0.8938448536997043 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1889 H4_OUTID2_ORIG = 2013 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 114.25831524594135 H4_P_Y = 129.0035356130022 H4_P_Z = 92.96657957432217 # Orientation: H4_DX_X = -0.28867354874101636 H4_DX_Y = -0.8323365684071575 H4_DX_Z = 0.4731632056166717 H4_DY_X = 0.6378436117633441 H4_DY_Y = 0.20137132070351527 H4_DY_Z = 0.7433741441096942 H4_DZ_X = -0.7140189837742241 H4_DZ_Y = 0.5163965802465214 H4_DZ_Z = 0.47276998923338454 ############# END of Description of junction: j53