#############  Start of Description of junction: j40
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS7HS8HS8HS9HS11
FINGERPRINT = 20:28:30:46:109:128:131:151:156:172
LOOP_LENGTH_SUM = 43
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2479
S1_NAME_ID3 = 2492
S1_NUM_ID5_ORIG =  2479
S1_NUM_ID3_ORIG = 2492
S1_NAME2_ID5 =  2481
S1_NAME2_ID3 = 2490
S1_NUM2_ID5_ORIG =  2481
S1_NUM2_ID3_ORIG = 2490
S1_SQ2 = GGAUAACAGA
S1_SQLEN2 = 10
S1_SQ = AGGGAUAACAGAGU
S1_SQLEN = 14
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  2093
S2_NAME_ID3 = 2107
S2_NUM_ID5_ORIG =  2093
S2_NUM_ID3_ORIG = 2107
S2_NAME2_ID5 =  2095
S2_NAME2_ID3 = 2105
S2_NUM2_ID5_ORIG =  2095
S2_NUM2_ID3_ORIG = 2105
S2_SQ2 = AAGCGAAGACC
S2_SQLEN2 = 11
S2_SQ = GGAAGCGAAGACCCU
S2_SQLEN = 15
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  2529
S3_NAME_ID3 = 2545
S3_NUM_ID5_ORIG =  2529
S3_NUM_ID3_ORIG = 2545
S3_NAME2_ID5 =  2531
S3_NAME2_ID3 = 2543
S3_NUM2_ID5_ORIG =  2531
S3_NUM2_ID3_ORIG = 2543
S3_SQ2 = UACCUCGAUGUCG
S3_SQLEN2 = 13
S3_SQ = GCUACCUCGAUGUCGGU
S3_SQLEN = 17
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  2613
S4_NAME_ID3 = 2625
S4_NUM_ID5_ORIG =  2613
S4_NUM_ID3_ORIG = 2625
S4_NAME2_ID5 =  2615
S4_NAME2_ID3 = 2623
S4_NUM2_ID5_ORIG =  2615
S4_NUM2_ID3_ORIG = 2623
S4_SQ2 = UGGGUUUAG
S4_SQLEN2 = 9
S4_SQ = GCUGGGUUUAGAC
S4_SQLEN = 13
S4_CHAR = 0
## Properties of strand 5
S5_NAME_ID5 =  2639
S5_NAME_ID3 = 2652
S5_NUM_ID5_ORIG =  2639
S5_NUM_ID3_ORIG = 2652
S5_NAME2_ID5 =  2641
S5_NAME2_ID3 = 2650
S5_NUM2_ID5_ORIG =  2641
S5_NUM2_ID3_ORIG = 2650
S5_SQ2 = CGGCUGCUAU
S5_SQLEN2 = 10
S5_SQ = GUCGGCUGCUAUCU
S5_SQLEN = 14
S5_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 15
H1_INID2 = 3
H1_OUTID2 = 13
H1_INID2_ORIG = 2481
H1_OUTID2_ORIG = 2105
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 71.31289233626053
H1_P_Y = 112.87256713446996
H1_P_Z = 82.96489178668257
# Orientation:
H1_DX_X = -0.39128964445228576
H1_DX_Y = -0.8871168651617154
H1_DX_Z = 0.2447776168076814
H1_DY_X = -0.6761844370674623
H1_DY_Y = 0.09672845916109907
H1_DY_Z = -0.7303548536540916
H1_DZ_X = 0.6242331465183355
H1_DZ_Y = -0.45129510603811696
H1_DZ_Z = -0.637703462475983
## Properties of helix 2
H2_INID = 1
H2_OUTID = 14
H2_INID2 = 3
H2_OUTID2 = 12
H2_INID2_ORIG = 2531
H2_OUTID2_ORIG = 2490
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.74402851747872
H2_P_Y = 108.31686245243229
H2_P_Z = 115.18797984484658
# Orientation:
H2_DX_X = -0.578724498233818
H2_DX_Y = -0.8093053562236463
H2_DX_Z = -0.10051266353907806
H2_DY_X = 0.8146864955177833
H2_DY_Y = -0.5793042709482563
H2_DY_Z = -0.026314932682197423
H2_DZ_X = -0.03693059930420617
H2_DZ_Y = -0.09711540582637213
H2_DZ_Z = 0.994587717994861
## Properties of helix 3
H3_INID = 1
H3_OUTID = 17
H3_INID2 = 3
H3_OUTID2 = 15
H3_INID2_ORIG = 2615
H3_OUTID2_ORIG = 2543
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 64.4921404025808
H3_P_Y = 130.31884730135948
H3_P_Z = 113.51983556954518
# Orientation:
H3_DX_X = 0.7189278259286027
H3_DX_Y = 0.539819128445231
H3_DX_Z = 0.43787908110597584
H3_DY_X = -0.4555634935057782
H3_DY_Y = 0.8417348856235947
H3_DY_Z = -0.2897314026975266
H3_DZ_X = -0.5249806515390816
H3_DZ_Y = 0.008814243522834886
H3_DZ_Z = 0.8510685193453611
## Properties of helix 4
H4_INID = 1
H4_OUTID = 13
H4_INID2 = 3
H4_OUTID2 = 11
H4_INID2_ORIG = 2641
H4_OUTID2_ORIG = 2623
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 91.14774352365124
H4_P_Y = 118.9504752426653
H4_P_Z = 94.21222539162004
# Orientation:
H4_DX_X = 0.699722520600389
H4_DX_Y = 0.7110313629565042
H4_DX_Z = -0.06944634660560212
H4_DY_X = 0.3127921572985173
H4_DY_Y = -0.21751359270756154
H4_DY_Z = 0.9245803931081298
H4_DZ_X = 0.6423001327239319
H4_DZ_Y = -0.6686719957345844
H4_DZ_Z = -0.3746041932802484
## Properties of helix 5
H5_INID = 1
H5_OUTID = 14
H5_INID2 = 3
H5_OUTID2 = 12
H5_INID2_ORIG = 2095
H5_OUTID2_ORIG = 2650
H5_INSEQ_CHAR = 0
H5_OUTSEQ_CHAR = 0
# Position:
H5_P_X = 48.3123827586663
H5_P_Y = 140.63653147685403
H5_P_Z = 107.27228806253093
# Orientation:
H5_DX_X = -0.7423886888402293
H5_DX_Y = -0.6637598080368434
H5_DX_Z = -0.09100523016272177
H5_DY_X = 0.436629808826531
H5_DY_Y = -0.5823680034085612
H5_DY_Z = 0.6857127085376646
H5_DZ_X = -0.508147069976971
H5_DZ_Y = 0.46932976236419677
H5_DZ_Z = 0.7221607365628415
#############  END of Description of junction: j40