#############  Start of Description of junction: j6
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS4HS8HS6HS9HS6
FINGERPRINT = 13:25:43:56:97:121:140:153:162:171
LOOP_LENGTH_SUM = 33
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2480
S1_NAME_ID3 = 2489
S1_NUM_ID5_ORIG =  2480
S1_NUM_ID3_ORIG = 2489
S1_NAME2_ID5 =  2481
S1_NAME2_ID3 = 2488
S1_NUM2_ID5_ORIG =  2481
S1_NUM2_ID3_ORIG = 2488
S1_SQ2 = GGAUAACA
S1_SQLEN2 = 8
S1_SQ = GGGAUAACAG
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  2094
S2_NAME_ID3 = 2106
S2_NUM_ID5_ORIG =  2094
S2_NUM_ID3_ORIG = 2106
S2_NAME2_ID5 =  2095
S2_NAME2_ID3 = 2105
S2_NUM2_ID5_ORIG =  2095
S2_NUM2_ID3_ORIG = 2105
S2_SQ2 = AAGCGAAGACC
S2_SQLEN2 = 11
S2_SQ = GAAGCGAAGACCC
S2_SQLEN = 13
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  2533
S3_NAME_ID3 = 2542
S3_NUM_ID5_ORIG =  2533
S3_NUM_ID3_ORIG = 2542
S3_NAME2_ID5 =  2534
S3_NAME2_ID3 = 2541
S3_NUM2_ID5_ORIG =  2534
S3_NUM2_ID3_ORIG = 2541
S3_SQ2 = CUCGAUGU
S3_SQLEN2 = 8
S3_SQ = CCUCGAUGUC
S3_SQLEN = 10
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  2617
S4_NAME_ID3 = 2624
S4_NUM_ID5_ORIG =  2617
S4_NUM_ID3_ORIG = 2624
S4_NAME2_ID5 =  2618
S4_NAME2_ID3 = 2623
S4_NUM2_ID5_ORIG =  2618
S4_NUM2_ID3_ORIG = 2623
S4_SQ2 = GUUUAG
S4_SQLEN2 = 6
S4_SQ = GGUUUAGA
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  2640
S5_NAME_ID3 = 2651
S5_NUM_ID5_ORIG =  2640
S5_NUM_ID3_ORIG = 2651
S5_NAME2_ID5 =  2641
S5_NAME2_ID3 = 2650
S5_NUM2_ID5_ORIG =  2641
S5_NUM2_ID3_ORIG = 2650
S5_SQ2 = CGGCUGCUAU
S5_SQLEN2 = 10
S5_SQ = UCGGCUGCUAUC
S5_SQLEN = 12
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 13
H1_INID2 = 2
H1_OUTID2 = 12
H1_INID2_ORIG = 2481
H1_OUTID2_ORIG = 2105
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 69.20950065399217
H1_P_Y = 115.08247935777237
H1_P_Z = 84.68968154153171
# Orientation:
H1_DX_X = 0.08066606106255847
H1_DX_Y = -0.8288296276744234
H1_DX_Z = 0.5536555200498867
H1_DY_X = -0.7533975237004569
H1_DY_Y = -0.4143822728688207
H1_DY_Z = -0.5105678243035925
H1_DZ_X = 0.6525987725047173
H1_DZ_Y = -0.3759372024968286
H1_DZ_Z = -0.6578647747859634
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 2
H2_OUTID2 = 9
H2_INID2_ORIG = 2534
H2_OUTID2_ORIG = 2488
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 62.38330343142645
H2_P_Y = 107.25120363540925
H2_P_Z = 106.74739786886566
# Orientation:
H2_DX_X = -0.45542486639556046
H2_DX_Y = 0.840521455138429
H2_DX_Z = 0.2934482484537426
H2_DY_X = -0.8882215557034527
H2_DY_Y = -0.4066119983056353
H2_DY_Z = -0.21384375328176475
H2_DZ_X = -0.06042068397758271
H2_DZ_Y = -0.35803682252792157
H2_DZ_Z = 0.9317504894883513
## Properties of helix 3
H3_INID = 1
H3_OUTID = 10
H3_INID2 = 2
H3_OUTID2 = 9
H3_INID2_ORIG = 2618
H3_OUTID2_ORIG = 2541
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 72.12409742479903
H3_P_Y = 131.8324192233361
H3_P_Z = 106.8956045209581
# Orientation:
H3_DX_X = -0.03138280456930431
H3_DX_Y = -0.9626421539862235
H3_DX_Z = 0.2689520458113748
H3_DY_X = 0.8905334840264203
H3_DY_Y = 0.09524999081330066
H3_DY_Z = 0.4448342984503739
H3_DZ_X = -0.45383392711997317
H3_DZ_Y = 0.25347095024642385
H3_DZ_Z = 0.8542758594131215
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 2641
H4_OUTID2_ORIG = 2623
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 89.01948243227699
H4_P_Y = 121.67823248600563
H4_P_Z = 95.14359052684253
# Orientation:
H4_DX_X = 0.48225530735413713
H4_DX_Y = 0.6980386237703158
H4_DX_Z = -0.5293126658730358
H4_DY_X = 0.6264785307895124
H4_DY_Y = 0.1475360534852257
H4_DY_Z = 0.7653481321476079
H4_DZ_X = 0.6123352586521378
H4_DZ_Y = -0.7006962199461668
H4_DZ_Z = -0.3661561666346387
## Properties of helix 5
H5_INID = 1
H5_OUTID = 12
H5_INID2 = 2
H5_OUTID2 = 11
H5_INID2_ORIG = 2095
H5_OUTID2_ORIG = 2650
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 49.6999166820596
H5_P_Y = 139.38844616087513
H5_P_Z = 106.0155981586534
# Orientation:
H5_DX_X = -0.8476317162452958
H5_DX_Y = -0.23942613820079828
H5_DX_Z = -0.47349297561981984
H5_DY_X = -0.03010497908696408
H5_DY_Y = -0.8692579271756813
H5_DY_Z = 0.49344133012587577
H5_DZ_X = -0.5297302746202348
H5_DZ_Y = 0.4325110176498299
H5_DZ_Z = 0.7296026697883491
#############  END of Description of junction: j6