#############  Start of Description of junction: j6
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS4HS8HS6HS9HS6
FINGERPRINT = 13:21:47:59:97:118:144:156:164:171
LOOP_LENGTH_SUM = 33
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2480
S1_NAME_ID3 = 2489
S1_NUM_ID5_ORIG =  2480
S1_NUM_ID3_ORIG = 2489
S1_NAME2_ID5 =  2481
S1_NAME2_ID3 = 2488
S1_NUM2_ID5_ORIG =  2481
S1_NUM2_ID3_ORIG = 2488
S1_SQ2 = GGAUAACA
S1_SQLEN2 = 8
S1_SQ = GGGAUAACAG
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  2094
S2_NAME_ID3 = 2106
S2_NUM_ID5_ORIG =  2094
S2_NUM_ID3_ORIG = 2106
S2_NAME2_ID5 =  2095
S2_NAME2_ID3 = 2105
S2_NUM2_ID5_ORIG =  2095
S2_NUM2_ID3_ORIG = 2105
S2_SQ2 = AAGCGAAGACC
S2_SQLEN2 = 11
S2_SQ = GAAGCGAAGACCC
S2_SQLEN = 13
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  2533
S3_NAME_ID3 = 2542
S3_NUM_ID5_ORIG =  2533
S3_NUM_ID3_ORIG = 2542
S3_NAME2_ID5 =  2534
S3_NAME2_ID3 = 2541
S3_NUM2_ID5_ORIG =  2534
S3_NUM2_ID3_ORIG = 2541
S3_SQ2 = CUCGAUGU
S3_SQLEN2 = 8
S3_SQ = CCUCGAUGUC
S3_SQLEN = 10
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  2617
S4_NAME_ID3 = 2624
S4_NUM_ID5_ORIG =  2617
S4_NUM_ID3_ORIG = 2624
S4_NAME2_ID5 =  2618
S4_NAME2_ID3 = 2623
S4_NUM2_ID5_ORIG =  2618
S4_NUM2_ID3_ORIG = 2623
S4_SQ2 = GUUUAG
S4_SQLEN2 = 6
S4_SQ = GGUUUAGA
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  2640
S5_NAME_ID3 = 2651
S5_NUM_ID5_ORIG =  2640
S5_NUM_ID3_ORIG = 2651
S5_NAME2_ID5 =  2641
S5_NAME2_ID3 = 2650
S5_NUM2_ID5_ORIG =  2641
S5_NUM2_ID3_ORIG = 2650
S5_SQ2 = CGGCUGCUAU
S5_SQLEN2 = 10
S5_SQ = UCGGCUGCUAUC
S5_SQLEN = 12
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 13
H1_INID2 = 2
H1_OUTID2 = 12
H1_INID2_ORIG = 2481
H1_OUTID2_ORIG = 2105
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 69.27221481421705
H1_P_Y = 115.057555138573
H1_P_Z = 84.27975437619071
# Orientation:
H1_DX_X = 0.08117183454010046
H1_DX_Y = -0.8086919706350244
H1_DX_Z = 0.5826048660179879
H1_DY_X = -0.7661378731349515
H1_DY_Y = -0.4245164815225593
H1_DY_Z = -0.4825127109869243
H1_DZ_X = 0.6375295229443338
H1_DZ_Y = -0.40718921098937244
H1_DZ_Z = -0.6540283280013313
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 2
H2_OUTID2 = 9
H2_INID2_ORIG = 2534
H2_OUTID2_ORIG = 2488
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 62.36504293798949
H2_P_Y = 107.46911007750923
H2_P_Z = 106.4604268891326
# Orientation:
H2_DX_X = -0.4719081005865462
H2_DX_Y = 0.8190081135082607
H2_DX_Z = 0.32638697064746225
H2_DY_X = -0.8810071049550672
H2_DY_Y = -0.42395106447278863
H2_DY_Z = -0.2099808942525243
H2_DZ_X = -0.03360395243848302
H2_DZ_Y = -0.3866409250713474
H2_DZ_Z = 0.9216179085936176
## Properties of helix 3
H3_INID = 1
H3_OUTID = 10
H3_INID2 = 2
H3_OUTID2 = 9
H3_INID2_ORIG = 2618
H3_OUTID2_ORIG = 2541
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 72.14107675720881
H3_P_Y = 131.6790260290661
H3_P_Z = 106.86563772616634
# Orientation:
H3_DX_X = -0.05526339242526035
H3_DX_Y = -0.96280715402483
H3_DX_Z = 0.26447748791960635
H3_DY_X = 0.8680842775258526
H3_DY_Y = 0.08454417119622804
H3_DY_Z = 0.48916456354604065
H3_DZ_X = -0.49333117129378934
H3_DZ_Y = 0.25662164225832385
H3_DZ_Z = 0.8311255549882617
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 2641
H4_OUTID2_ORIG = 2623
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 89.5371937108335
H4_P_Y = 121.7148665267569
H4_P_Z = 94.78110855540278
# Orientation:
H4_DX_X = 0.4319063500186786
H4_DX_Y = 0.7439057012062449
H4_DX_Z = -0.5099619716472858
H4_DY_X = 0.6118080774228787
H4_DY_Y = 0.17378952443888807
H4_DY_Z = 0.7716787398881877
H4_DZ_X = 0.6626822626369773
H4_DZ_Y = -0.6452918013644222
H4_DZ_Z = -0.3800667176670345
## Properties of helix 5
H5_INID = 1
H5_OUTID = 12
H5_INID2 = 2
H5_OUTID2 = 11
H5_INID2_ORIG = 2095
H5_OUTID2_ORIG = 2650
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 49.98471804599348
H5_P_Y = 139.8744647078912
H5_P_Z = 105.62310560558466
# Orientation:
H5_DX_X = -0.8589045649526739
H5_DX_Y = -0.23091777481894837
H5_DX_Z = -0.4571213510394472
H5_DY_X = -0.04333577149458279
H5_DY_Y = -0.8566071965352933
H5_DY_Z = 0.514146012094713
H5_DZ_X = -0.5102988920352729
H5_DZ_Y = 0.4614120632543006
H5_DZ_Z = 0.7257368315518846
#############  END of Description of junction: j6