############# Start of Description of junction: j8 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 131 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 370 S1_NAME_ID3 = 378 S1_NUM_ID5_ORIG = 370 S1_NUM_ID3_ORIG = 378 S1_NAME2_ID5 = 372 S1_NAME2_ID3 = 376 S1_NUM2_ID5_ORIG = 372 S1_NUM2_ID3_ORIG = 376 S1_SQ2 = CAAUG S1_SQLEN2 = 5 S1_SQ = CGCAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 385 S2_NAME_ID3 = 391 S2_NUM_ID5_ORIG = 385 S2_NUM_ID3_ORIG = 391 S2_NAME2_ID5 = 387 S2_NAME2_ID3 = 389 S2_NUM2_ID5_ORIG = 387 S2_NUM2_ID3_ORIG = 389 S2_SQ2 = UGA S2_SQLEN2 = 3 S2_SQ = CCUGACG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 372 H1_OUTID2_ORIG = 389 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 134.01772443502338 H1_P_Y = 66.55874062918907 H1_P_Z = 20.120467641245163 # Orientation: H1_DX_X = -0.8054323839951394 H1_DX_Y = 0.5778324744001537 H1_DX_Z = 0.13186472743122124 H1_DY_X = 0.09201310902568594 H1_DY_Y = -0.09788144616418037 H1_DY_Z = 0.9909353209287879 H1_DZ_X = 0.5855017186817975 H1_DZ_Y = 0.8102646814624279 H1_DZ_Z = 0.02566872406734433 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 387 H2_OUTID2_ORIG = 376 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 110.89622039142542 H2_P_Y = 61.76100925449473 H2_P_Z = 17.732529728589384 # Orientation: H2_DX_X = 0.46319154733077994 H2_DX_Y = -0.11416084517288283 H2_DX_Z = -0.8788747873905223 H2_DY_X = 0.08146606234072351 H2_DY_Y = -0.9819860879721816 H2_DY_Z = 0.17048930674907936 H2_DZ_X = -0.8825060176384198 H2_DZ_Y = -0.15056767401570426 H2_DZ_Z = -0.4455474210154051 ############# END of Description of junction: j8