############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS2 FINGERPRINT = 80 LOOP_LENGTH_SUM = 2 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 247 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 247 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 249 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 249 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UAGU S1_SQLEN2 = 4 S1_SQ = GCUAGUUG S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 272 S2_NAME_ID3 = 277 S2_NUM_ID5_ORIG = 272 S2_NUM_ID3_ORIG = 277 S2_NAME2_ID5 = 274 S2_NAME2_ID3 = 275 S2_NUM2_ID5_ORIG = 274 S2_NUM2_ID3_ORIG = 275 S2_SQ2 = AG S2_SQLEN2 = 2 S2_SQ = CAAGGC S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 249 H1_OUTID2_ORIG = 275 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 139.97466503341974 H1_P_Y = 78.73007521554399 H1_P_Z = -41.27950098353012 # Orientation: H1_DX_X = -0.6727594875662533 H1_DX_Y = -0.19334669450500996 H1_DX_Z = 0.7141510537789557 H1_DY_X = 0.733199924701097 H1_DY_Y = -0.04499314998544435 H1_DY_Z = 0.6785230186756195 H1_DZ_X = -0.09905827733155093 H1_DZ_Y = 0.980098297202062 H1_DZ_Z = 0.1720313503804647 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 125.66808847172317 H2_P_Y = 61.35321186672418 H2_P_Z = -37.49936803906491 # Orientation: H2_DX_X = -0.10782941155174797 H2_DX_Y = 0.9881461251852173 H2_DX_Z = -0.10927055086275317 H2_DY_X = -0.6216965837375454 H2_DY_Y = -0.15279118853383977 H2_DY_Z = -0.7682110455307836 H2_DZ_X = -0.7758003453037929 H2_DZ_Y = -0.014902616812648262 H2_DZ_Z = 0.6308024542110289 ############# END of Description of junction: j9