############# Start of Description of junction: j5 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 145 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 620 S1_NAME_ID3 = 628 S1_NUM_ID5_ORIG = 620 S1_NUM_ID3_ORIG = 628 S1_NAME2_ID5 = 622 S1_NAME2_ID3 = 626 S1_NUM2_ID5_ORIG = 622 S1_NUM2_ID3_ORIG = 626 S1_SQ2 = GGAUA S1_SQLEN2 = 5 S1_SQ = UGGGAUACG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 580 S2_NAME_ID3 = 586 S2_NUM_ID5_ORIG = 580 S2_NUM_ID3_ORIG = 586 S2_NAME2_ID5 = 582 S2_NAME2_ID3 = 584 S2_NUM2_ID5_ORIG = 582 S2_NUM2_ID3_ORIG = 584 S2_SQ2 = UCC S2_SQLEN2 = 3 S2_SQ = CGUCCCA S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 622 H1_OUTID2_ORIG = 584 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 107.28788763196494 H1_P_Y = 131.0591627957058 H1_P_Z = 138.3184045974656 # Orientation: H1_DX_X = 0.9104496638482971 H1_DX_Y = -0.278198048259668 H1_DX_Z = 0.30608373942931166 H1_DY_X = 0.35105343805686573 H1_DY_Y = 0.9110658786474346 H1_DY_Z = -0.21614913461044694 H1_DZ_X = -0.21873018362121854 H1_DZ_Y = 0.30424465600714257 H1_DZ_Z = 0.9271420042604746 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 582 H2_OUTID2_ORIG = 626 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 106.592422243233 H2_P_Y = 121.17429616983162 H2_P_Z = 117.43878713402184 # Orientation: H2_DX_X = -0.9012941779987642 H2_DX_Y = -0.3504701228685576 H2_DX_Z = 0.25463601018320503 H2_DY_X = -0.3294973730348971 H2_DY_Y = 0.9362042717571484 H2_DY_Z = 0.12228263452666965 H2_DZ_X = -0.28124773042397067 H2_DZ_Y = 0.02631073013378682 H2_DZ_Z = -0.959274444364695 ############# END of Description of junction: j5