#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS2HS4
FINGERPRINT = 77:82:94:107:159:170
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  24
S1_NAME_ID3 = 27
S1_NUM_ID5_ORIG =  24
S1_NUM_ID3_ORIG = 27
S1_NAME2_ID5 =  25
S1_NAME2_ID3 = 26
S1_NUM2_ID5_ORIG =  25
S1_NUM2_ID3_ORIG = 26
S1_SQ2 = CA
S1_SQLEN2 = 2
S1_SQ = GCAC
S1_SQLEN = 4
S1_CHAR = T
## Properties of strand 2
S2_NAME_ID5 =  6
S2_NAME_ID3 = 11
S2_NUM_ID5_ORIG =  6
S2_NUM_ID3_ORIG = 11
S2_NAME2_ID5 =  7
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  7
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = GUAG
S2_SQLEN2 = 4
S2_SQ = AGUAGC
S2_SQLEN = 6
S2_CHAR = T
## Properties of strand 3
S3_NAME_ID5 =  43
S3_NAME_ID3 = 50
S3_NUM_ID5_ORIG =  43
S3_NUM_ID3_ORIG = 50
S3_NAME2_ID5 =  44
S3_NAME2_ID3 = 49
S3_NUM2_ID5_ORIG =  44
S3_NUM2_ID3_ORIG = 49
S3_SQ2 = GGGGCG
S3_SQLEN2 = 6
S3_SQ = GGGGGCGC
S3_SQLEN = 8
S3_CHAR = T
## Properties of strand 4
S4_NAME_ID5 =  64
S4_NAME_ID3 = 67
S4_NUM_ID5_ORIG =  64
S4_NUM_ID3_ORIG = 67
S4_NAME2_ID5 =  65
S4_NAME2_ID3 = 66
S4_NUM2_ID5_ORIG =  65
S4_NUM2_ID3_ORIG = 66
S4_SQ2 = UC
S4_SQLEN2 = 2
S4_SQ = GUCU
S4_SQLEN = 4
S4_CHAR = T
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 25
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = T
H1_OUTSEQ_CHAR = T
# Position:
H1_P_X = 8.082034196370472
H1_P_Y = 71.28904088177087
H1_P_Z = 99.39688593075105
# Orientation:
H1_DX_X = -0.3491270293072617
H1_DX_Y = 0.75252933129795
H1_DX_Z = -0.5583994295693202
H1_DY_X = -0.3625425923374008
H1_DY_Y = -0.6579635376308204
H1_DY_Z = -0.6600354929014003
H1_DZ_X = -0.8641025321964779
H1_DZ_Y = -0.02799265411823626
H1_DZ_Z = 0.5025367898642372
## Properties of helix 2
H2_INID = 1
H2_OUTID = 4
H2_INID2 = 2
H2_OUTID2 = 3
H2_INID2_ORIG = 44
H2_OUTID2_ORIG = 26
H2_INSEQ_CHAR = T
H2_OUTSEQ_CHAR = T
# Position:
H2_P_X = 18.466350548148043
H2_P_Y = 67.0717953937206
H2_P_Z = 90.79138482870023
# Orientation:
H2_DX_X = -0.026903690352327203
H2_DX_Y = 0.9866857364904149
H2_DX_Z = 0.16039778318854303
H2_DY_X = 0.7736647550166538
H2_DY_Y = -0.08105696405122842
H2_DY_Z = 0.6283889045995465
H2_DZ_X = 0.633023726483021
H2_DZ_Y = 0.14100009214597264
H2_DZ_Z = -0.7611832471385469
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 2
H3_OUTID2 = 7
H3_INID2_ORIG = 65
H3_OUTID2_ORIG = 49
H3_INSEQ_CHAR = T
H3_OUTSEQ_CHAR = T
# Position:
H3_P_X = -6.182949333661281
H3_P_Y = 72.94747479537182
H3_P_Z = 114.3058083546962
# Orientation:
H3_DX_X = 0.556438790889553
H3_DX_Y = 0.8231453683473262
H3_DX_Z = -0.1131705551886597
H3_DY_X = -0.4545930906749742
H3_DY_Y = 0.415610499658257
H3_DY_Z = 0.7877899685096139
H3_DZ_X = 0.695500534797743
H3_DZ_Y = -0.38691034509579936
H3_DZ_Z = 0.6054580009826509
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 7
H4_OUTID2_ORIG = 66
H4_INSEQ_CHAR = T
H4_OUTSEQ_CHAR = T
# Position:
H4_P_X = -14.892822322155139
H4_P_Y = 78.69991338365213
H4_P_Z = 105.25405249935933
# Orientation:
H4_DX_X = 0.6719311572347326
H4_DX_Y = 0.7400667865219219
H4_DX_Z = -0.028454725869721642
H4_DY_X = 0.41934119812759363
H4_DY_Y = -0.41184031221662565
H4_DY_Z = -0.8090367833332692
H4_DZ_X = -0.6104600556056958
H4_DZ_Y = 0.5316847832319809
H4_DZ_Z = -0.5870688305381719
#############  END of Description of junction: j1