############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 20:64:73:100:110:173 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 125.66642926628467 H1_P_Y = 77.88164613442248 H1_P_Z = -17.08008970693154 # Orientation: H1_DX_X = 0.292317184483025 H1_DX_Y = 0.3770633325382846 H1_DX_Z = 0.8788480567828714 H1_DY_X = -0.18247929789660589 H1_DY_Y = 0.9240953916670804 H1_DY_Z = -0.33578119801269324 H1_DZ_X = -0.9387502167749915 H1_DZ_Y = -0.062216961954121075 H1_DZ_Z = 0.33893521527001624 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 125.9745625141266 H2_P_Y = 61.12588222869941 H2_P_Z = -37.59924788825188 # Orientation: H2_DX_X = -0.11651463808398432 H2_DX_Y = 0.9869985396944614 H2_DX_Z = -0.11071685397065067 H2_DY_X = -0.6253416525872382 H2_DY_Y = -0.15950911875699347 H2_DY_Z = -0.7638747662888363 H2_DZ_X = -0.7716036266449464 H2_DZ_Y = -0.019766731504368806 H2_DZ_Z = 0.6357964451567923 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 136.01464883667174 H3_P_Y = 79.4411726396761 H3_P_Z = 1.56587286898516 # Orientation: H3_DX_X = -0.38766225220774686 H3_DX_Y = 0.3479182501724267 H3_DX_Z = -0.8536222053169384 H3_DY_X = -0.8428012543514569 H3_DY_Y = 0.2413071224349892 H3_DY_Z = 0.48109969686724074 H3_DZ_X = 0.3733684827041941 H3_DZ_Y = 0.905938057407397 H3_DZ_Z = 0.19968027510017938 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 128.36538803214808 H4_P_Y = 64.73410549913119 H4_P_Z = -0.9473633738041762 # Orientation: H4_DX_X = 0.7258915858670605 H4_DX_Y = -0.2871001770613333 H4_DX_Z = -0.6250239146614901 H4_DY_X = 0.5276166067813222 H4_DY_Y = -0.35054220004788306 H4_DY_Z = 0.7737834853718202 H4_DZ_X = -0.44125063378535856 H4_DZ_Y = -0.8914559183251498 H4_DZ_Z = -0.10297681227866795 ############# END of Description of junction: j4