############# Start of Description of junction: j34 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS6HS4HS4 FINGERPRINT = 30:56:64:67:97:107 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1235 S1_NAME_ID3 = 1242 S1_NUM_ID5_ORIG = 1235 S1_NUM_ID3_ORIG = 1242 S1_NAME2_ID5 = 1236 S1_NAME2_ID3 = 1241 S1_NUM2_ID5_ORIG = 1236 S1_NUM2_ID3_ORIG = 1241 S1_SQ2 = ACAAUG S1_SQLEN2 = 6 S1_SQ = UACAAUGC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 943 S2_NAME_ID3 = 946 S2_NUM_ID5_ORIG = 943 S2_NUM_ID3_ORIG = 946 S2_NAME2_ID5 = 944 S2_NAME2_ID3 = 945 S2_NUM2_ID5_ORIG = 944 S2_NUM2_ID3_ORIG = 945 S2_SQ2 = GG S2_SQLEN2 = 2 S2_SQ = UGGA S2_SQLEN = 4 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1295 S3_NAME_ID3 = 1304 S3_NUM_ID5_ORIG = 1295 S3_NUM_ID3_ORIG = 1304 S3_NAME2_ID5 = 1296 S3_NAME2_ID3 = 1303 S3_NUM2_ID5_ORIG = 1296 S3_NUM2_ID3_ORIG = 1303 S3_SQ2 = CCCAGUUC S3_SQLEN2 = 8 S3_SQ = GCCCAGUUCG S3_SQLEN = 10 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1333 S4_NAME_ID3 = 1340 S4_NUM_ID5_ORIG = 1333 S4_NUM_ID3_ORIG = 1340 S4_NAME2_ID5 = 1334 S4_NAME2_ID3 = 1339 S4_NUM2_ID5_ORIG = 1334 S4_NUM2_ID3_ORIG = 1339 S4_SQ2 = GCCGGA S4_SQLEN2 = 6 S4_SQ = AGCCGGAA S4_SQLEN = 8 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 4 H1_INID2 = 2 H1_OUTID2 = 3 H1_INID2_ORIG = 1236 H1_OUTID2_ORIG = 945 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 235.89331549844482 H1_P_Y = 116.87428167469253 H1_P_Z = -6.490161226471753 # Orientation: H1_DX_X = 0.7554058315514283 H1_DX_Y = -0.5861307796652966 H1_DX_Z = -0.29293811426142913 H1_DY_X = 0.6102545125580434 H1_DY_Y = 0.46648766449025914 H1_DY_Z = 0.640295782260786 H1_DZ_X = -0.238645049310918 H1_DZ_Y = -0.6624499739658773 H1_DZ_Z = 0.7100764553426648 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 2 H2_OUTID2 = 7 H2_INID2_ORIG = 1296 H2_OUTID2_ORIG = 1241 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 257.1361395402628 H2_P_Y = 137.0665782996545 H2_P_Z = -10.677509952419888 # Orientation: H2_DX_X = -0.3293460735594067 H2_DX_Y = -0.9050627247393948 H2_DX_Z = 0.26905878190142296 H2_DY_X = 0.874089932843674 H2_DY_Y = -0.18448631102353374 H2_DY_Z = 0.44936798989941984 H2_DZ_X = -0.3570685552275563 H2_DZ_Y = 0.3831791556598887 H2_DZ_Z = 0.8518660584478503 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 1334 H3_OUTID2_ORIG = 1303 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 256.72076848740676 H3_P_Y = 115.21360636842178 H3_P_Z = -5.667051947002707 # Orientation: H3_DX_X = -0.6163115256132414 H3_DX_Y = 0.7847455650022255 H3_DX_Z = -0.06583693192753426 H3_DY_X = -0.780844508966112 H3_DY_Y = -0.5981134092356228 H3_DY_Z = 0.18039457450267005 H3_DZ_X = 0.10218589048264448 H3_DZ_Y = 0.1625876622068887 H3_DZ_Z = 0.9813884531032393 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 8 H4_INID2 = 2 H4_OUTID2 = 7 H4_INID2_ORIG = 944 H4_OUTID2_ORIG = 1339 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 230.6471715912038 H4_P_Y = 120.8723144637653 H4_P_Z = -18.66284209225265 # Orientation: H4_DX_X = -0.5821399050205969 H4_DX_Y = -0.8130872765472361 H4_DX_Z = 0.0014871784048580139 H4_DY_X = -0.10902596081703564 H4_DY_Y = 0.07987075650673603 H4_DY_Z = 0.990824909922523 H4_DZ_X = -0.805745909608305 H4_DZ_Y = 0.5766365778998477 H4_DZ_Z = -0.1351435761604236 ############# END of Description of junction: j34