############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 18:65:72:101:110:173 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 125.6742206836313 H1_P_Y = 77.81827597792062 H1_P_Z = -16.752857085808373 # Orientation: H1_DX_X = 0.3165038949327226 H1_DX_Y = 0.3716246721326826 H1_DX_Z = 0.8727659408768709 H1_DY_X = -0.18559987865874916 H1_DY_Y = 0.9265431468631675 H1_DY_Z = -0.32721626188615005 H1_DZ_X = -0.9302569373749918 H1_DZ_Y = -0.05842003135194318 H1_DZ_Z = 0.3622280088598373 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 126.09477784785597 H2_P_Y = 61.05478173077233 H2_P_Z = -37.27592252279928 # Orientation: H2_DX_X = -0.12657158448418215 H2_DX_Y = 0.9834751553343111 H2_DX_Z = -0.12944594563492018 H2_DY_X = -0.6170504828806713 H2_DY_Y = -0.18023567749231262 H2_DY_Z = -0.766005092760885 H2_DZ_X = -0.7766777553000281 H2_DZ_Y = -0.017079795052730162 H2_DZ_Z = 0.6296665347809665 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 136.1215648580224 H3_P_Y = 79.65550143684099 H3_P_Z = 1.544713601411516 # Orientation: H3_DX_X = -0.38324045982056987 H3_DX_Y = 0.32291542815308105 H3_DX_Z = -0.8653625692258857 H3_DY_X = -0.8449376620390581 H3_DY_Y = 0.2558895099149652 H3_DY_Z = 0.4696817070990402 H3_DZ_X = 0.3731046732815173 H3_DZ_Y = 0.911178459455769 H3_DZ_Z = 0.17477619345695183 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 128.6704684397347 H4_P_Y = 64.77065327225554 H4_P_Z = -0.8314682690869155 # Orientation: H4_DX_X = 0.7197121840473528 H4_DX_Y = -0.2919753640525329 H4_DX_Z = -0.6298926566647628 H4_DY_X = 0.5437347329214504 H4_DY_Y = -0.32709954658687934 H4_DY_Z = 0.7728896601957536 H4_DZ_X = -0.43170234230154847 H4_DZ_Y = -0.8987526208078833 H4_DZ_Z = -0.07666038248219675 ############# END of Description of junction: j4