############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 132 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 370 S1_NAME_ID3 = 378 S1_NUM_ID5_ORIG = 370 S1_NUM_ID3_ORIG = 378 S1_NAME2_ID5 = 372 S1_NAME2_ID3 = 376 S1_NUM2_ID5_ORIG = 372 S1_NUM2_ID3_ORIG = 376 S1_SQ2 = CAAUG S1_SQLEN2 = 5 S1_SQ = CGCAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 385 S2_NAME_ID3 = 391 S2_NUM_ID5_ORIG = 385 S2_NUM_ID3_ORIG = 391 S2_NAME2_ID5 = 387 S2_NAME2_ID3 = 389 S2_NUM2_ID5_ORIG = 387 S2_NUM2_ID3_ORIG = 389 S2_SQ2 = UGA S2_SQLEN2 = 3 S2_SQ = CCUGACG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 372 H1_OUTID2_ORIG = 389 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 133.19776798999033 H1_P_Y = 66.26443215054272 H1_P_Z = 20.120253707523364 # Orientation: H1_DX_X = -0.8245785656061457 H1_DX_Y = 0.5536525846556515 H1_DX_Z = 0.1163572285980976 H1_DY_X = 0.05880707618413794 H1_DY_Y = -0.12067669255699798 H1_DY_Z = 0.9909484667045909 H1_DZ_X = 0.5626827853538714 H1_DZ_Y = 0.8239574936716281 H1_DZ_Z = 0.06694872432534638 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 387 H2_OUTID2_ORIG = 376 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 110.22336095249418 H2_P_Y = 61.088011610321466 H2_P_Z = 17.251513855059486 # Orientation: H2_DX_X = 0.4604812851479778 H2_DX_Y = -0.1225027727224699 H2_DX_Z = -0.879175782596274 H2_DY_X = 0.09848020798109758 H2_DY_Y = -0.9772671934456554 H2_DY_Z = 0.18775111517870968 H2_DZ_X = -0.8821896817943724 H2_DZ_Y = -0.17303728872748536 H2_DZ_Z = -0.43794915463484685 ############# END of Description of junction: j9