#############  Start of Description of junction: j41
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS4HS4
FINGERPRINT = 157
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1226
S1_NAME_ID3 = 1235
S1_NUM_ID5_ORIG =  1226
S1_NUM_ID3_ORIG = 1235
S1_NAME2_ID5 =  1228
S1_NAME2_ID3 = 1233
S1_NUM2_ID5_ORIG =  1228
S1_NUM2_ID3_ORIG = 1233
S1_SQ2 = UACAAA
S1_SQLEN2 = 6
S1_SQ = ACUACAAAGC
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  1264
S2_NAME_ID3 = 1273
S2_NUM_ID5_ORIG =  1264
S2_NUM_ID3_ORIG = 1273
S2_NAME2_ID5 =  1266
S2_NAME2_ID3 = 1271
S2_NUM2_ID5_ORIG =  1266
S2_NUM2_ID3_ORIG = 1271
S2_SQ2 = AAAAAG
S2_SQLEN2 = 6
S2_SQ = GCAAAAAGGU
S2_SQLEN = 10
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 10
H1_INID2 = 3
H1_OUTID2 = 8
H1_INID2_ORIG = 1228
H1_OUTID2_ORIG = 1271
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -16.13067381056065
H1_P_Y = 54.910093143018265
H1_P_Z = 144.24394125703915
# Orientation:
H1_DX_X = 0.08778660365891255
H1_DX_Y = -0.95814720593836
H1_DX_Z = -0.2724838416687305
H1_DY_X = -0.8954874787622558
H1_DY_Y = -0.1957266103605022
H1_DY_Z = 0.3997415031952585
H1_DZ_X = -0.436343543091958
H1_DZ_Y = 0.2089139194723657
H1_DZ_Z = -0.8751910000980558
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 1266
H2_OUTID2_ORIG = 1233
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 4.941372687399216
H2_P_Y = 50.050064867394454
H2_P_Z = 171.12471257046445
# Orientation:
H2_DX_X = -0.09678649838186182
H2_DX_Y = 0.9832541081776611
H2_DX_Z = -0.1544141589451158
H2_DY_X = -0.8473417809255119
H2_DY_Y = -1.0093130910604486E-5
H2_DY_Z = 0.5310479321079242
H2_DZ_X = 0.5221535023620634
H2_DZ_Y = 0.18223983826233336
H2_DZ_Z = 0.8331532640043804
#############  END of Description of junction: j41