############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 132 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 365 S1_NAME_ID3 = 373 S1_NUM_ID5_ORIG = 365 S1_NUM_ID3_ORIG = 373 S1_NAME2_ID5 = 367 S1_NAME2_ID3 = 371 S1_NUM2_ID5_ORIG = 367 S1_NUM2_ID3_ORIG = 371 S1_SQ2 = CAAUG S1_SQLEN2 = 5 S1_SQ = CGCAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 380 S2_NAME_ID3 = 386 S2_NUM_ID5_ORIG = 380 S2_NUM_ID3_ORIG = 386 S2_NAME2_ID5 = 382 S2_NAME2_ID3 = 384 S2_NUM2_ID5_ORIG = 382 S2_NUM2_ID3_ORIG = 384 S2_SQ2 = UGA S2_SQLEN2 = 3 S2_SQ = CCUGACG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 367 H1_OUTID2_ORIG = 384 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 82.76726493003618 H1_P_Y = 158.0044692873363 H1_P_Z = 170.73428141494978 # Orientation: H1_DX_X = 0.9446108010266698 H1_DX_Y = -0.3048199640155076 H1_DX_Z = 0.12163562028180763 H1_DY_X = -0.08418801439631807 H1_DY_Y = 0.13316607809201741 H1_DY_Z = 0.9875116069584067 H1_DZ_X = -0.31721099100717254 H1_DZ_Y = -0.9430543914235159 H1_DZ_Z = 0.10012792817727245 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 382 H2_OUTID2_ORIG = 371 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 103.61447124185968 H2_P_Y = 168.80800428507592 H2_P_Z = 167.91037667497807 # Orientation: H2_DX_X = -0.454822710283338 H2_DX_Y = -0.02220254268254962 H2_DX_Z = -0.8903052000909497 H2_DY_X = -0.3557727136040967 H2_DY_Y = 0.9209852047204095 H2_DY_Z = 0.15878296174619777 H2_DZ_X = 0.8164325314839544 H2_DZ_Y = 0.38896439398041593 H2_DZ_Z = -0.4267840458008436 ############# END of Description of junction: j9