############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 145 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 621 S1_NAME_ID3 = 629 S1_NUM_ID5_ORIG = 621 S1_NUM_ID3_ORIG = 629 S1_NAME2_ID5 = 623 S1_NAME2_ID3 = 627 S1_NUM2_ID5_ORIG = 623 S1_NUM2_ID3_ORIG = 627 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 576 S2_NAME_ID3 = 583 S2_NUM_ID5_ORIG = 576 S2_NUM_ID3_ORIG = 583 S2_NAME2_ID5 = 578 S2_NAME2_ID3 = 581 S2_NUM2_ID5_ORIG = 578 S2_NUM2_ID3_ORIG = 581 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 623 H1_OUTID2_ORIG = 581 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 107.96098870669113 H1_P_Y = 128.60144163252278 H1_P_Z = 132.67104679890096 # Orientation: H1_DX_X = 0.11938741902172012 H1_DX_Y = -0.9558679420999852 H1_DX_Z = 0.2684457514002929 H1_DY_X = 0.9701163697764059 H1_DY_Y = 0.1698345912299999 H1_DY_Z = 0.17329293324772266 H1_DZ_X = -0.2112365339404647 H1_DZ_Y = 0.23973462179520766 H1_DZ_Z = 0.9475792514832335 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 578 H2_OUTID2_ORIG = 627 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 104.58352143592303 H2_P_Y = 116.179003341369 H2_P_Z = 112.84712340804852 # Orientation: H2_DX_X = -0.4121798964615806 H2_DX_Y = 0.9110878134090683 H2_DX_Z = 0.0051700300202099925 H2_DY_X = 0.8269479173232241 H2_DY_Y = 0.37648454095123896 H2_DY_Z = -0.4176320539177141 H2_DZ_X = -0.382445911192292 H2_DZ_Y = -0.16786419118513152 H2_DZ_Z = -0.908601528905848 ############# END of Description of junction: j13