############# Start of Description of junction: j7 # Number of strands: NUM_STRANDS = 5 LILLEY = HS2HS2HS2HS2HS4 FINGERPRINT = 9:52:54:83:91:97:100:107:134:142 LOOP_LENGTH_SUM = 12 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 396 S1_NAME_ID3 = 403 S1_NUM_ID5_ORIG = 396 S1_NUM_ID3_ORIG = 403 S1_NAME2_ID5 = 398 S1_NAME2_ID3 = 401 S1_NUM2_ID5_ORIG = 398 S1_NUM2_ID3_ORIG = 401 S1_SQ2 = CUUG S1_SQLEN2 = 4 S1_SQ = CGCUUGGA S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 34 S2_NAME_ID3 = 41 S2_NUM_ID5_ORIG = 34 S2_NUM_ID3_ORIG = 41 S2_NAME2_ID5 = 36 S2_NAME2_ID3 = 39 S2_NUM2_ID5_ORIG = 36 S2_NUM2_ID3_ORIG = 39 S2_SQ2 = CUGG S2_SQLEN2 = 4 S2_SQ = CGCUGGCG S2_SQLEN = 8 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 429 S3_NAME_ID3 = 436 S3_NUM_ID5_ORIG = 429 S3_NUM_ID3_ORIG = 436 S3_NAME2_ID5 = 431 S3_NAME2_ID3 = 434 S3_NUM2_ID5_ORIG = 431 S3_NUM2_ID3_ORIG = 434 S3_SQ2 = CUGA S3_SQLEN2 = 4 S3_SQ = UCCUGAAC S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 476 S4_NAME_ID3 = 485 S4_NUM_ID5_ORIG = 476 S4_NUM_ID3_ORIG = 485 S4_NAME2_ID5 = 478 S4_NAME2_ID3 = 483 S4_NUM2_ID5_ORIG = 478 S4_NUM2_ID3_ORIG = 483 S4_SQ2 = UAAUAG S4_SQLEN2 = 6 S4_SQ = GGUAAUAGCG S4_SQLEN = 10 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 526 S5_NAME_ID3 = 533 S5_NUM_ID5_ORIG = 526 S5_NUM_ID3_ORIG = 533 S5_NAME2_ID5 = 528 S5_NAME2_ID3 = 531 S5_NUM2_ID5_ORIG = 528 S5_NUM2_ID3_ORIG = 531 S5_SQ2 = CGAG S5_SQLEN2 = 4 S5_SQ = CGCGAGCG S5_SQLEN = 8 S5_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 398 H1_OUTID2_ORIG = 39 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 76.844071550873 H1_P_Y = 138.6861088337516 H1_P_Z = 176.23661972057172 # Orientation: H1_DX_X = 0.535432138704337 H1_DX_Y = 0.24765049994937272 H1_DX_Z = 0.8074538096493882 H1_DY_X = 0.8253720265826132 H1_DY_Y = -0.35615774877024364 H1_DY_Z = -0.43807838993245696 H1_DZ_X = 0.17909059879690403 H1_DZ_Y = 0.9010110364838511 H1_DZ_Z = -0.39510210016757696 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 431 H2_OUTID2_ORIG = 401 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 71.10994106786848 H2_P_Y = 118.49454261350697 H2_P_Z = 198.84282023870387 # Orientation: H2_DX_X = 0.9122612271645778 H2_DX_Y = -0.3797514959273087 H2_DX_Z = -0.15351955821043362 H2_DY_X = -0.005256853863471633 H2_DY_Y = -0.3856189957955536 H2_DY_Z = 0.9226431355454281 H2_DZ_X = -0.4095751688025189 H2_DZ_Y = -0.8408845291849474 H2_DZ_Z = -0.3537815564409641 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 478 H3_OUTID2_ORIG = 434 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 86.89514018790084 H3_P_Y = 139.8853857418421 H3_P_Z = 198.45717869494007 # Orientation: H3_DX_X = -0.9534892388469416 H3_DX_Y = 0.286272057271276 H3_DX_Z = 0.09437468213843658 H3_DY_X = 0.1643531732053276 H3_DY_Y = 0.23129398524810085 H3_DY_Z = 0.9589009995017364 H3_DZ_X = 0.25267826550852135 H3_DZ_Y = 0.9298125626241642 H3_DZ_Z = -0.26758604695663735 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 10 H4_INID2 = 3 H4_OUTID2 = 8 H4_INID2_ORIG = 528 H4_OUTID2_ORIG = 483 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 59.20832991808574 H4_P_Y = 119.56990229419863 H4_P_Z = 179.66893328235054 # Orientation: H4_DX_X = 0.18138726688112428 H4_DX_Y = 0.5485718299216558 H4_DX_Z = -0.8161909132242329 H4_DY_X = 0.28288999835039874 H4_DY_Y = -0.8239841429027166 H4_DY_Z = -0.49094132142059266 H4_DZ_X = -0.9418449491538965 H4_DZ_Y = -0.14184174160413932 H4_DZ_Z = -0.3046457156961253 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 36 H5_OUTID2_ORIG = 531 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 67.92114609854954 H5_P_Y = 133.95954897397468 H5_P_Z = 167.10928736376977 # Orientation: H5_DX_X = -0.5492547073862681 H5_DX_Y = -0.792811282044596 H5_DX_Z = 0.2641392388056829 H5_DY_X = -0.8069806806961566 H5_DY_Y = 0.4211229186052208 H5_DY_Z = -0.41405032110674256 H5_DZ_X = 0.21702867874360265 H5_DZ_Y = -0.4405743506926285 H5_DZ_Z = -0.8710871334801027 ############# END of Description of junction: j7