############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 135 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 365 S1_NAME_ID3 = 373 S1_NUM_ID5_ORIG = 365 S1_NUM_ID3_ORIG = 373 S1_NAME2_ID5 = 367 S1_NAME2_ID3 = 371 S1_NUM2_ID5_ORIG = 367 S1_NUM2_ID3_ORIG = 371 S1_SQ2 = CAAUG S1_SQLEN2 = 5 S1_SQ = CGCAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 380 S2_NAME_ID3 = 386 S2_NUM_ID5_ORIG = 380 S2_NUM_ID3_ORIG = 386 S2_NAME2_ID5 = 382 S2_NAME2_ID3 = 384 S2_NUM2_ID5_ORIG = 382 S2_NUM2_ID3_ORIG = 384 S2_SQ2 = UGA S2_SQLEN2 = 3 S2_SQ = CCUGACG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 367 H1_OUTID2_ORIG = 384 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 82.67457719992794 H1_P_Y = 158.29668789748112 H1_P_Z = 170.63871220338214 # Orientation: H1_DX_X = 0.9293317334192608 H1_DX_Y = -0.3443528548503423 H1_DX_Z = 0.1332803084344505 H1_DY_X = -0.09583050425365514 H1_DY_Y = 0.12365491803157624 H1_DY_Z = 0.9876871851457167 H1_DZ_X = -0.3565936675187089 H1_DZ_Y = -0.9306613630118363 H1_DZ_Z = 0.08191693159861302 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 382 H2_OUTID2_ORIG = 371 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 103.57037156340066 H2_P_Y = 168.76739131117088 H2_P_Z = 168.37359268179063 # Orientation: H2_DX_X = -0.4578622890451669 H2_DX_Y = -0.016619087337630845 H2_DX_Z = -0.8888677799349125 H2_DY_X = -0.36985252562585913 H2_DY_Y = 0.9127567585013026 H2_DY_Z = 0.17344800113684755 H2_DZ_X = 0.8084375260701933 H2_DZ_Y = 0.4081652921871921 H2_DZ_Z = -0.4240635102142676 ############# END of Description of junction: j3