############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS2 FINGERPRINT = 78 LOOP_LENGTH_SUM = 2 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 247 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 247 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 249 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 249 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UAGU S1_SQLEN2 = 4 S1_SQ = GCUAGUUG S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 272 S2_NAME_ID3 = 277 S2_NUM_ID5_ORIG = 272 S2_NUM_ID3_ORIG = 277 S2_NAME2_ID5 = 274 S2_NAME2_ID3 = 275 S2_NUM2_ID5_ORIG = 274 S2_NUM2_ID3_ORIG = 275 S2_SQ2 = AG S2_SQLEN2 = 2 S2_SQ = CAAGGC S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 249 H1_OUTID2_ORIG = 275 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 140.0661636739158 H1_P_Y = 78.54618868449404 H1_P_Z = -41.413727297071944 # Orientation: H1_DX_X = -0.6630942087524261 H1_DX_Y = -0.20557842419458439 H1_DX_Z = 0.7197524448201946 H1_DY_X = 0.7391507668499457 H1_DY_Y = -0.02804217062772807 H1_DY_Z = 0.6729560019285188 H1_DZ_X = -0.118161813561386 H1_DZ_Y = 0.9782387991549655 H1_DZ_Z = 0.1705480508353432 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 125.95898217187035 H2_P_Y = 61.39819200423982 H2_P_Z = -37.612854875923645 # Orientation: H2_DX_X = -0.0897568722812565 H2_DX_Y = 0.9878030194629588 H2_DX_Z = -0.12723560279321333 H2_DY_X = -0.6288504980296636 H2_DY_Y = -0.1552737796156265 H2_DY_Z = -0.7618642296969469 H2_DZ_X = -0.772328139462843 H2_DZ_Y = 0.011629621823040281 H2_DZ_Z = 0.6351173095500826 ############# END of Description of junction: j9