############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 133 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 370 S1_NAME_ID3 = 378 S1_NUM_ID5_ORIG = 370 S1_NUM_ID3_ORIG = 378 S1_NAME2_ID5 = 372 S1_NAME2_ID3 = 376 S1_NUM2_ID5_ORIG = 372 S1_NUM2_ID3_ORIG = 376 S1_SQ2 = CAAUG S1_SQLEN2 = 5 S1_SQ = CGCAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 385 S2_NAME_ID3 = 391 S2_NUM_ID5_ORIG = 385 S2_NUM_ID3_ORIG = 391 S2_NAME2_ID5 = 387 S2_NAME2_ID3 = 389 S2_NUM2_ID5_ORIG = 387 S2_NUM2_ID3_ORIG = 389 S2_SQ2 = UGA S2_SQLEN2 = 3 S2_SQ = CCUGACG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 372 H1_OUTID2_ORIG = 389 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 133.8884297437206 H1_P_Y = 65.26516449483154 H1_P_Z = 19.102628499342245 # Orientation: H1_DX_X = -0.7914044031963954 H1_DX_Y = 0.59265174582589 H1_DX_Z = 0.1498098086604358 H1_DY_X = 0.08417164077135908 H1_DY_Y = -0.13708712902457876 H1_DY_Z = 0.9869763188373177 H1_DZ_X = 0.6054702350167247 H1_DZ_Y = 0.7937071419770234 H1_DZ_Z = 0.05860688767941369 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 387 H2_OUTID2_ORIG = 376 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 110.7966590207168 H2_P_Y = 60.648078466774926 H2_P_Z = 16.992503768044134 # Orientation: H2_DX_X = 0.43837779234560514 H2_DX_Y = -0.10726483237098705 H2_DX_Z = -0.8923671704599023 H2_DY_X = 0.08208701176990019 H2_DY_Y = -0.9839253456657744 H2_DY_Z = 0.1585958279879378 H2_DZ_X = -0.8950344315594094 H2_DZ_Y = -0.14277664337318896 H2_DZ_Z = -0.42252597130851655 ############# END of Description of junction: j9