############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 18:64:73:100:110:173 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 124.97026298980084 H1_P_Y = 77.52473071689697 H1_P_Z = -17.846451522782317 # Orientation: H1_DX_X = 0.32632604982357805 H1_DX_Y = 0.3816410515755848 H1_DX_Z = 0.864789810855104 H1_DY_X = -0.20567418052495157 H1_DY_Y = 0.9216205419309347 H1_DY_Z = -0.3291104801678273 H1_DZ_X = -0.9226101238724311 H1_DZ_Y = -0.07046761272523838 H1_DZ_Z = 0.3792425014220875 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 124.84380299074098 H2_P_Y = 60.9696250824091 H2_P_Z = -38.43541281524069 # Orientation: H2_DX_X = -0.12331935756462542 H2_DX_Y = 0.9843188750871832 H2_DX_Z = -0.12612964836615959 H2_DY_X = -0.6358912991252765 H2_DY_Y = -0.17595738887451517 H2_DY_Z = -0.7514527616538658 H2_DZ_X = -0.7618625806184411 H2_DZ_Y = -0.012463925849544921 H2_DZ_Z = 0.6476187603874735 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.82188301866216 H3_P_Y = 78.7892518724212 H3_P_Z = 0.43333068908845007 # Orientation: H3_DX_X = -0.41713061694821363 H3_DX_Y = 0.36282075499350697 H3_DX_Z = -0.8332845541292291 H3_DY_X = -0.8205704177704831 H3_DY_Y = 0.24382169006730692 H3_DY_Z = 0.5169285955842672 H3_DZ_X = 0.39072527162238657 H3_DZ_Y = 0.8993953986977488 H3_DZ_Z = 0.19601448649766795 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 128.11708772384938 H4_P_Y = 64.08734487490321 H4_P_Z = -1.7841224695432718 # Orientation: H4_DX_X = 0.7079448801864032 H4_DX_Y = -0.28004219916228834 H4_DX_Z = -0.648375210280443 H4_DY_X = 0.5549992865429942 H4_DY_Y = -0.34717537111118446 H4_DY_Z = 0.7559398478917208 H4_DZ_X = -0.4367949616864166 H4_DZ_Y = -0.8950115241616459 H4_DZ_Z = -0.09035780576797992 ############# END of Description of junction: j4