############# Start of Description of junction: j11 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 145 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 116.77609535117392 H1_P_Y = 100.85517183964105 H1_P_Z = -18.34261881633372 # Orientation: H1_DX_X = 0.1218160630492946 H1_DX_Y = 0.9590650248997861 H1_DX_Z = 0.2556464840304926 H1_DY_X = -0.9833347639759324 H1_DY_Y = 0.08159181839035057 H1_DY_Z = 0.16246697242256758 H1_DZ_X = 0.13495772945469753 H1_DZ_Y = -0.27117716199146 H1_DZ_Z = 0.9530211739907415 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 122.88529086515143 H2_P_Y = 111.84192936840543 H2_P_Z = -38.56444974430448 # Orientation: H2_DX_X = 0.18723050835959043 H2_DX_Y = -0.9821187647302736 H2_DX_Z = 0.01968422475209053 H2_DY_X = -0.8824182161144876 H2_DY_Y = -0.17696055972578506 H2_DY_Z = -0.43591633620554404 H2_DZ_X = 0.4316049450698358 H2_DZ_Y = 0.0642471187386775 H2_DZ_Z = -0.8997719039429057 ############# END of Description of junction: j11