############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS2HS4 FINGERPRINT = 73:87:97:103:160:174 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 923 S1_NAME_ID3 = 926 S1_NUM_ID5_ORIG = 923 S1_NUM_ID3_ORIG = 926 S1_NAME2_ID5 = 924 S1_NAME2_ID3 = 925 S1_NUM2_ID5_ORIG = 924 S1_NUM2_ID3_ORIG = 925 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGC S1_SQLEN = 4 S1_CHAR = D ## Properties of strand 2 S2_NAME_ID5 = 906 S2_NAME_ID3 = 911 S2_NUM_ID5_ORIG = 906 S2_NUM_ID3_ORIG = 911 S2_NAME2_ID5 = 907 S2_NAME2_ID3 = 910 S2_NUM2_ID5_ORIG = 907 S2_NUM2_ID3_ORIG = 910 S2_SQ2 = CUAG S2_SQLEN2 = 4 S2_SQ = GCUAGC S2_SQLEN = 6 S2_CHAR = D ## Properties of strand 3 S3_NAME_ID5 = 942 S3_NAME_ID3 = 949 S3_NUM_ID5_ORIG = 942 S3_NUM_ID3_ORIG = 949 S3_NAME2_ID5 = 943 S3_NAME2_ID3 = 948 S3_NUM2_ID5_ORIG = 943 S3_NUM2_ID3_ORIG = 948 S3_SQ2 = AGGUCG S3_SQLEN2 = 6 S3_SQ = GAGGUCGU S3_SQLEN = 8 S3_CHAR = D ## Properties of strand 4 S4_NAME_ID5 = 963 S4_NAME_ID3 = 966 S4_NUM_ID5_ORIG = 963 S4_NUM_ID3_ORIG = 966 S4_NAME2_ID5 = 964 S4_NAME2_ID3 = 965 S4_NUM2_ID5_ORIG = 964 S4_NUM2_ID3_ORIG = 965 S4_SQ2 = CG S4_SQLEN2 = 2 S4_SQ = ACGC S4_SQLEN = 4 S4_CHAR = D ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 924 H1_OUTID2_ORIG = 910 H1_INSEQ_CHAR = D H1_OUTSEQ_CHAR = D # Position: H1_P_X = 143.6025040620667 H1_P_Y = 111.69354596407165 H1_P_Z = 16.83676858518296 # Orientation: H1_DX_X = 0.25185964526278326 H1_DX_Y = 0.7927671143397106 H1_DX_Z = -0.5550558724214945 H1_DY_X = 0.6871134484726724 H1_DY_Y = 0.25740523993447084 H1_DY_Z = 0.6794245001339334 H1_DZ_X = 0.6814996904005852 H1_DZ_Y = -0.5525059681811229 H1_DZ_Z = -0.4798909533510276 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 943 H2_OUTID2_ORIG = 925 H2_INSEQ_CHAR = D H2_OUTSEQ_CHAR = D # Position: H2_P_X = 136.79780581970928 H2_P_Y = 118.79271067821037 H2_P_Z = 27.306457602259815 # Orientation: H2_DX_X = -0.13913119886771597 H2_DX_Y = 0.42211353639609683 H2_DX_Z = -0.8958028085984218 H2_DY_X = -0.8934024816204555 H2_DY_Y = -0.44371846238765045 H2_DY_Z = -0.07032732023023769 H2_DZ_X = -0.42717035868147946 H2_DZ_Y = 0.7905277278676124 H2_DZ_Z = 0.4388523625735772 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 2 H3_OUTID2 = 7 H3_INID2_ORIG = 964 H3_OUTID2_ORIG = 948 H3_INSEQ_CHAR = D H3_OUTSEQ_CHAR = D # Position: H3_P_X = 153.44463851323405 H3_P_Y = 98.03454792016706 H3_P_Z = 4.312313963313158 # Orientation: H3_DX_X = -0.7498334414666203 H3_DX_Y = 0.45556127280343617 H3_DX_Z = -0.4798059365827281 H3_DY_X = 0.1710797947005176 H3_DY_Y = -0.5670276234247495 H3_DY_Z = -0.8057365438643793 H3_DZ_X = -0.6391255853926907 H3_DZ_Y = -0.6862533067279202 H3_DZ_Z = 0.3472389452544933 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 4 H4_INID2 = 2 H4_OUTID2 = 3 H4_INID2_ORIG = 907 H4_OUTID2_ORIG = 965 H4_INSEQ_CHAR = D H4_OUTSEQ_CHAR = D # Position: H4_P_X = 161.6476270926672 H4_P_Y = 105.84851232101214 H4_P_Z = 0.6235988871295195 # Orientation: H4_DX_X = -0.6942632814633498 H4_DX_Y = 0.5695057181893048 H4_DX_Z = -0.44007014550115175 H4_DY_X = -0.09338160176591259 H4_DY_Y = 0.5349989703634321 H4_DY_Z = 0.8396761150358574 H4_DZ_X = 0.7136374236706899 H4_DZ_Y = 0.6240507500674681 H4_DZ_Z = -0.31824878456466354 ############# END of Description of junction: j3