############# Start of Description of junction: j15 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS5HS2 FINGERPRINT = 35:47:133:139:152:172 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1305 S1_NAME_ID3 = 1310 S1_NUM_ID5_ORIG = 1305 S1_NUM_ID3_ORIG = 1310 S1_NAME2_ID5 = 1307 S1_NAME2_ID3 = 1308 S1_NUM2_ID5_ORIG = 1307 S1_NUM2_ID3_ORIG = 1308 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CUUCGC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1281 S2_NAME_ID3 = 1291 S2_NUM_ID5_ORIG = 1281 S2_NUM_ID3_ORIG = 1291 S2_NAME2_ID5 = 1283 S2_NAME2_ID3 = 1289 S2_NUM2_ID5_ORIG = 1283 S2_NUM2_ID3_ORIG = 1289 S2_SQ2 = CGAUAAA S2_SQLEN2 = 7 S2_SQ = AACGAUAAAAG S2_SQLEN = 11 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1660 S3_NAME_ID3 = 1667 S3_NUM_ID5_ORIG = 1660 S3_NUM_ID3_ORIG = 1667 S3_NAME2_ID5 = 1662 S3_NAME2_ID3 = 1665 S3_NUM2_ID5_ORIG = 1662 S3_NUM2_ID3_ORIG = 1665 S3_SQ2 = GCGC S3_SQLEN2 = 4 S3_SQ = GCGCGCGA S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1990 S4_NAME_ID3 = 1995 S4_NUM_ID5_ORIG = 1990 S4_NUM_ID3_ORIG = 1995 S4_NAME2_ID5 = 1992 S4_NAME2_ID3 = 1993 S4_NUM2_ID5_ORIG = 1992 S4_NUM2_ID3_ORIG = 1993 S4_SQ2 = GG S4_SQLEN2 = 2 S4_SQ = UCGGUG S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 1307 H1_OUTID2_ORIG = 1289 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 14.380836696116882 H1_P_Y = 120.47151719973347 H1_P_Z = 162.24680701033344 # Orientation: H1_DX_X = 0.3348840647142879 H1_DX_Y = -0.8087218961510274 H1_DX_Z = 0.4835509878868436 H1_DY_X = -0.5515096449870391 H1_DY_Y = 0.2478639732220671 H1_DY_Z = 0.7964926630326659 H1_DZ_X = -0.7639959258312281 H1_DZ_Y = -0.5334157341740706 H1_DZ_Z = -0.3630122309906483 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1662 H2_OUTID2_ORIG = 1308 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 28.42246108322377 H2_P_Y = 131.23245664127222 H2_P_Z = 168.49373428811734 # Orientation: H2_DX_X = 0.5405742323586153 H2_DX_Y = -0.5362209114726113 H2_DX_Z = -0.6482643237209516 H2_DY_X = -0.06931446431440236 H2_DY_Y = 0.7395469734119615 H2_DY_Z = -0.6695265335698082 H2_DZ_X = 0.8384360466646861 H2_DZ_Y = 0.4068628862610808 H2_DZ_Z = 0.36261217221240827 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 1992 H3_OUTID2_ORIG = 1665 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 28.091214452889705 H3_P_Y = 110.56283892560387 H3_P_Z = 146.85573837802872 # Orientation: H3_DX_X = -0.7065766063594303 H3_DX_Y = -0.15102891568942312 H3_DX_Z = 0.6913318783126385 H3_DY_X = 0.05798455547072834 H3_DY_Y = -0.9860305615497538 H3_DY_Z = -0.15614583893511735 H3_DZ_X = 0.7052568969336299 H3_DZ_Y = -0.07024242532521896 H3_DZ_Z = 0.7054634724859739 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 1283 H4_OUTID2_ORIG = 1993 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 20.13704260686875 H4_P_Y = 109.1087603053142 H4_P_Z = 134.44115792024832 # Orientation: H4_DX_X = -0.286674226104207 H4_DX_Y = 0.9567522661836705 H4_DX_Z = -0.04942660457641068 H4_DY_X = 0.8950808482530412 H4_DY_Y = 0.2490889859096228 H4_DY_Z = -0.36984449730817914 H4_DZ_X = -0.34153793812427224 H4_DZ_Y = -0.15026569219523367 H4_DZ_Z = -0.9277780222504362 ############# END of Description of junction: j15