############# Start of Description of junction: j42 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS14HS12HS4 FINGERPRINT = 23:51:66:135:140:147 LOOP_LENGTH_SUM = 30 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1721 S1_NAME_ID3 = 1726 S1_NUM_ID5_ORIG = 1721 S1_NUM_ID3_ORIG = 1726 S1_NAME2_ID5 = 1723 S1_NAME2_ID3 = 1724 S1_NUM2_ID5_ORIG = 1723 S1_NUM2_ID3_ORIG = 1724 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = GGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1682 S2_NAME_ID3 = 1701 S2_NUM_ID5_ORIG = 1682 S2_NUM_ID3_ORIG = 1701 S2_NAME2_ID5 = 1684 S2_NAME2_ID3 = 1699 S2_NUM2_ID5_ORIG = 1684 S2_NUM2_ID3_ORIG = 1699 S2_SQ2 = GAACUUUGCAAUCUCA S2_SQLEN2 = 16 S2_SQ = AGGAACUUUGCAAUCUCACC S2_SQLEN = 20 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1740 S3_NAME_ID3 = 1757 S3_NUM_ID5_ORIG = 1740 S3_NUM_ID3_ORIG = 1757 S3_NAME2_ID5 = 1742 S3_NAME2_ID3 = 1755 S3_NUM2_ID5_ORIG = 1742 S3_NUM2_ID3_ORIG = 1755 S3_SQ2 = GCGCAGUGAAUAGG S3_SQLEN2 = 14 S3_SQ = GGGCGCAGUGAAUAGGCC S3_SQLEN = 18 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1969 S4_NAME_ID3 = 1978 S4_NUM_ID5_ORIG = 1969 S4_NUM_ID3_ORIG = 1978 S4_NAME2_ID5 = 1971 S4_NAME2_ID3 = 1976 S4_NUM2_ID5_ORIG = 1971 S4_NUM2_ID3_ORIG = 1976 S4_SQ2 = CGCUGU S4_SQLEN2 = 6 S4_SQ = GGCGCUGUCU S4_SQLEN = 10 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 20 H1_INID2 = 3 H1_OUTID2 = 18 H1_INID2_ORIG = 1723 H1_OUTID2_ORIG = 1699 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 68.74387892345469 H1_P_Y = 135.68172448033792 H1_P_Z = 167.52219730615914 # Orientation: H1_DX_X = -0.4632187064293021 H1_DX_Y = 0.5572738734150846 H1_DX_Z = 0.6891112101997408 H1_DY_X = 0.671273393672223 H1_DY_Y = -0.2870570317799661 H1_DY_Z = 0.6833668791018681 H1_DZ_X = 0.5786367262469128 H1_DZ_Y = 0.7791303424425564 H1_DZ_Z = -0.24111293727963812 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1742 H2_OUTID2_ORIG = 1724 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 61.75844401214661 H2_P_Y = 133.5530274572342 H2_P_Z = 188.2576763470724 # Orientation: H2_DX_X = -0.8248640529869107 H2_DX_Y = -0.4502213514469702 H2_DX_Z = 0.3419064620496215 H2_DY_X = 0.45666919923557714 H2_DY_Y = -0.17414027083529504 H2_DY_Z = 0.8724267353439643 H2_DZ_X = -0.3332454599233614 H2_DZ_Y = 0.8757716030876281 H2_DZ_Z = 0.34924427363347377 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 18 H3_INID2 = 3 H3_OUTID2 = 16 H3_INID2_ORIG = 1971 H3_OUTID2_ORIG = 1755 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 71.6750816403831 H3_P_Y = 131.19655258205665 H3_P_Z = 145.33098423081952 # Orientation: H3_DX_X = 0.4406752373964622 H3_DX_Y = 0.2059933567313692 H3_DX_Z = 0.8737116641822809 H3_DY_X = 0.8731257338949376 H3_DY_Y = -0.324390373691557 H3_DY_Z = -0.3638988022331091 H3_DZ_X = 0.20846291746023837 H3_DZ_Y = 0.923221329064063 H3_DZ_Z = -0.32280890570919496 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 10 H4_INID2 = 3 H4_OUTID2 = 8 H4_INID2_ORIG = 1684 H4_OUTID2_ORIG = 1976 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 59.978832679410736 H4_P_Y = 105.90676365032495 H4_P_Z = 151.4489591005159 # Orientation: H4_DX_X = 0.6256272015900919 H4_DX_Y = -0.039812917721036456 H4_DX_Z = -0.7791056001679522 H4_DY_X = 0.645837427038181 H4_DY_Y = -0.5337609988760619 H4_DY_Z = 0.5458875469504108 H4_DZ_X = -0.43758955936726096 H4_DZ_Y = -0.8446976545849765 H4_DZ_Z = -0.3082227277009224 ############# END of Description of junction: j42