############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS12HS3HS4 FINGERPRINT = 28:69:80:85:102:105:126:153:155:169 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 113 S1_NAME_ID3 = 121 S1_NUM_ID5_ORIG = 113 S1_NUM_ID3_ORIG = 121 S1_NAME2_ID5 = 115 S1_NAME2_ID3 = 119 S1_NUM2_ID5_ORIG = 115 S1_NUM2_ID3_ORIG = 119 S1_SQ2 = GAAUG S1_SQLEN2 = 5 S1_SQ = CCGAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 45 S2_NAME_ID3 = 54 S2_NUM_ID5_ORIG = 45 S2_NUM_ID3_ORIG = 54 S2_NAME2_ID5 = 47 S2_NAME2_ID3 = 52 S2_NUM2_ID5_ORIG = 47 S2_NUM2_ID3_ORIG = 52 S2_SQ2 = GAUGAA S2_SQLEN2 = 6 S2_SQ = CCGAUGAAGG S2_SQLEN = 10 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 126 S3_NAME_ID3 = 131 S3_NUM_ID5_ORIG = 126 S3_NUM_ID3_ORIG = 131 S3_NAME2_ID5 = 128 S3_NAME2_ID3 = 129 S3_NUM2_ID5_ORIG = 128 S3_NUM2_ID3_ORIG = 129 S3_SQ2 = CA S3_SQLEN2 = 2 S3_SQ = CCCACC S3_SQLEN = 6 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 140 S4_NAME_ID3 = 146 S4_NUM_ID5_ORIG = 140 S4_NUM_ID3_ORIG = 146 S4_NAME2_ID5 = 142 S4_NAME2_ID3 = 144 S4_NUM2_ID5_ORIG = 142 S4_NUM2_ID3_ORIG = 144 S4_SQ2 = UAU S4_SQLEN2 = 3 S4_SQ = GGUAUCC S4_SQLEN = 7 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 151 S5_NAME_ID3 = 156 S5_NUM_ID5_ORIG = 151 S5_NUM_ID3_ORIG = 156 S5_NAME2_ID5 = 153 S5_NAME2_ID3 = 154 S5_NUM2_ID5_ORIG = 153 S5_NUM2_ID3_ORIG = 154 S5_SQ2 = AU S5_SQLEN2 = 2 S5_SQ = GGAUGG S5_SQLEN = 6 S5_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 10 H1_INID2 = 3 H1_OUTID2 = 8 H1_INID2_ORIG = 115 H1_OUTID2_ORIG = 52 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -1.4264206663045842 H1_P_Y = 164.23086399672493 H1_P_Z = 123.59815338261667 # Orientation: H1_DX_X = 0.8053067110476462 H1_DX_Y = -0.5848179966598082 H1_DX_Z = -0.09730884813018292 H1_DY_X = 0.26944349683666546 H1_DY_Y = 0.21482945841484025 H1_DY_Z = 0.9387483719344658 H1_DZ_X = -0.5280921350995955 H1_DZ_Y = -0.7821996002172398 H1_DZ_Z = 0.3305790106252431 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 128 H2_OUTID2_ORIG = 119 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 11.660633031696268 H2_P_Y = 172.31319027476238 H2_P_Z = 129.1797707603371 # Orientation: H2_DX_X = 0.7327097909870588 H2_DX_Y = 0.497631239532069 H2_DX_Z = 0.4642192495292363 H2_DY_X = 0.13618424570072918 H2_DY_Y = -0.7755505251563761 H2_DY_Z = 0.6164213122147828 H2_DZ_X = 0.6667759844315153 H2_DZ_Y = -0.3884385824959793 H2_DZ_Z = -0.6360229981800103 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 3 H3_OUTID2 = 4 H3_INID2_ORIG = 142 H3_OUTID2_ORIG = 129 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = -0.028920218840330136 H3_P_Y = 184.32894504730248 H3_P_Z = 138.79702853194738 # Orientation: H3_DX_X = 0.5810871652005742 H3_DX_Y = 0.7969063575698385 H3_DX_Z = -0.1651604180907782 H3_DY_X = -0.6227432302105452 H3_DY_Y = 0.3047363924586932 H3_DY_Z = -0.7206431851743389 H3_DZ_X = -0.5239547458188305 H3_DZ_Y = 0.5216090378588376 H3_DZ_Z = 0.6733464457156515 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 7 H4_INID2 = 3 H4_OUTID2 = 5 H4_INID2_ORIG = 153 H4_OUTID2_ORIG = 144 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 8.759054961414456 H4_P_Y = 193.34245316253572 H4_P_Z = 116.44171609995253 # Orientation: H4_DX_X = 0.7136726967823108 H4_DX_Y = -0.1936112743315448 H4_DX_Z = -0.6731908765864176 H4_DY_X = -0.6671240564832388 H4_DY_Y = 0.10516358835639039 H4_DY_Z = -0.7374863476332081 H4_DZ_X = 0.2135808397979968 H4_DZ_Y = 0.9754256989313603 H4_DZ_Z = -0.0541103570073318 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 6 H5_INID2 = 3 H5_OUTID2 = 4 H5_INID2_ORIG = 47 H5_OUTID2_ORIG = 154 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 10.246241883057174 H5_P_Y = 171.25558563105596 H5_P_Z = 103.56401441528801 # Orientation: H5_DX_X = -0.016033832996722452 H5_DX_Y = -0.39784196707040564 H5_DX_Z = 0.9173138423881824 H5_DY_X = -0.8153256606750112 H5_DY_Y = -0.525857739166554 H5_DY_Z = -0.24231736463468678 H5_DZ_X = 0.5787806002660147 H5_DZ_Y = -0.7517947907482494 H5_DZ_Z = -0.3159392494761022 ############# END of Description of junction: j2