############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS5 FINGERPRINT = 63 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 276 S1_NAME_ID3 = 286 S1_NUM_ID5_ORIG = 276 S1_NUM_ID3_ORIG = 286 S1_NAME2_ID5 = 278 S1_NAME2_ID3 = 284 S1_NUM2_ID5_ORIG = 278 S1_NUM2_ID3_ORIG = 284 S1_SQ2 = GACGACG S1_SQLEN2 = 7 S1_SQ = GCGACGACGGG S1_SQLEN = 11 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 240 S2_NAME_ID3 = 248 S2_NUM_ID5_ORIG = 240 S2_NUM_ID3_ORIG = 248 S2_NAME2_ID5 = 242 S2_NAME2_ID3 = 246 S2_NUM2_ID5_ORIG = 242 S2_NUM2_ID3_ORIG = 246 S2_SQ2 = CAUCA S2_SQLEN2 = 5 S2_SQ = CCCAUCAGC S2_SQLEN = 9 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 278 H1_OUTID2_ORIG = 246 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 141.0010812220546 H1_P_Y = 71.49709422657098 H1_P_Z = -42.5302473402784 # Orientation: H1_DX_X = 0.31711903467694924 H1_DX_Y = -0.11527504478272022 H1_DX_Z = 0.9413539089502407 H1_DY_X = -0.9411151764369095 H1_DY_Y = -0.16092053084757652 H1_DY_Z = 0.2973328226614953 H1_DZ_X = 0.117208116296041 H1_DZ_Y = -0.9802123478114737 H1_DZ_Z = -0.1595180575115407 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 242 H2_OUTID2_ORIG = 284 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 142.51519356410938 H2_P_Y = 74.12831683298543 H2_P_Z = -18.331706280197274 # Orientation: H2_DX_X = 0.9801282519366055 H2_DX_Y = -0.16575465945309986 H2_DX_Z = 0.10896789722349354 H2_DY_X = 0.05956159288913909 H2_DY_Y = 0.7698979698409829 H2_DY_Z = 0.6353814072564994 H2_DZ_X = -0.18921159163284074 H2_DZ_Y = -0.6162649664749154 H2_DZ_Z = 0.7644713628955913 ############# END of Description of junction: j9