############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 143 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 116.58239866044448 H1_P_Y = 100.60407657482362 H1_P_Z = -18.526320473469436 # Orientation: H1_DX_X = 0.12608593647867394 H1_DX_Y = 0.9586979408474576 H1_DX_Z = 0.25495214224860163 H1_DY_X = -0.9789036650697227 H1_DY_Y = 0.07858657951737769 H1_DY_Z = 0.18860478263511382 H1_DZ_X = 0.16077919994631884 H1_DZ_Y = -0.273353997107435 H1_DZ_Z = 0.948381590463466 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 122.81627143444031 H2_P_Y = 111.73210003492504 H2_P_Z = -38.43431623345831 # Orientation: H2_DX_X = 0.19482336450812454 H2_DX_Y = -0.9808208738273692 H2_DX_Z = 0.005854067497303106 H2_DY_X = -0.8764879953534574 H2_DY_Y = -0.1767720970915576 H2_DY_Z = -0.447795064388977 H2_DZ_X = 0.44024158213758824 H2_DZ_Y = 0.08210992116902105 H2_DZ_Z = -0.8941170562083087 ############# END of Description of junction: j13