############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 15:66:73:101:109:173 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 125.3449296722932 H1_P_Y = 77.8955495272664 H1_P_Z = -17.31023231551672 # Orientation: H1_DX_X = 0.32735294226752387 H1_DX_Y = 0.3853261059029762 H1_DX_Z = 0.8627652306963114 H1_DY_X = -0.1840431754104941 H1_DY_Y = 0.9215874704037645 H1_DY_Z = -0.34176694395391394 H1_DZ_X = -0.92680535214987 H1_DZ_Y = -0.04690763801802689 H1_DZ_Z = 0.3726010100924988 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 125.52382827648518 H2_P_Y = 61.12491026012484 H2_P_Z = -37.75777406299529 # Orientation: H2_DX_X = -0.11697578456629287 H2_DX_Y = 0.9801576746510818 H2_DX_Z = -0.16002374401222852 H2_DY_X = -0.5881602029272841 H2_DY_Y = -0.1982048619173682 H2_DY_Z = -0.7840806134606524 H2_DZ_X = -0.8002401149140326 H2_DZ_Y = 0.002401152828625186 H2_DZ_Z = 0.5996749060511704 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.86485300156733 H3_P_Y = 79.45648017633336 H3_P_Z = 1.0948260249443091 # Orientation: H3_DX_X = -0.39372695012670533 H3_DX_Y = 0.3454692110550184 H3_DX_Z = -0.8518392530031373 H3_DY_X = -0.8378422987236149 H3_DY_Y = 0.24635100471036253 H3_DY_Z = 0.4871667732385736 H3_DZ_X = 0.3781525766320044 H3_DZ_Y = 0.9055176457094802 H3_DZ_Z = 0.19245368818330388 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 128.29219565447266 H4_P_Y = 64.32948455121739 H4_P_Z = -0.9396410010867058 # Orientation: H4_DX_X = 0.70955536040384 H4_DX_Y = -0.2761466571523812 H4_DX_Z = -0.6482855962195547 H4_DY_X = 0.5596776052626637 H4_DY_Y = -0.3381140332809238 H4_DY_Z = 0.7565975671821501 H4_DZ_X = -0.4281263466426992 H4_DZ_Y = -0.8996787894810439 H4_DZ_Z = -0.08535752496589077 ############# END of Description of junction: j4