############# Start of Description of junction: j43 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS14HS12HS4 FINGERPRINT = 25:51:66:135:140:147 LOOP_LENGTH_SUM = 30 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1721 S1_NAME_ID3 = 1726 S1_NUM_ID5_ORIG = 1721 S1_NUM_ID3_ORIG = 1726 S1_NAME2_ID5 = 1723 S1_NAME2_ID3 = 1724 S1_NUM2_ID5_ORIG = 1723 S1_NUM2_ID3_ORIG = 1724 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = GGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1682 S2_NAME_ID3 = 1701 S2_NUM_ID5_ORIG = 1682 S2_NUM_ID3_ORIG = 1701 S2_NAME2_ID5 = 1684 S2_NAME2_ID3 = 1699 S2_NUM2_ID5_ORIG = 1684 S2_NUM2_ID3_ORIG = 1699 S2_SQ2 = GAACUUUGCAAUCUCA S2_SQLEN2 = 16 S2_SQ = AGGAACUUUGCAAUCUCACC S2_SQLEN = 20 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1740 S3_NAME_ID3 = 1757 S3_NUM_ID5_ORIG = 1740 S3_NUM_ID3_ORIG = 1757 S3_NAME2_ID5 = 1742 S3_NAME2_ID3 = 1755 S3_NUM2_ID5_ORIG = 1742 S3_NUM2_ID3_ORIG = 1755 S3_SQ2 = GCGCAGUGAAUAGG S3_SQLEN2 = 14 S3_SQ = GGGCGCAGUGAAUAGGCC S3_SQLEN = 18 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1969 S4_NAME_ID3 = 1978 S4_NUM_ID5_ORIG = 1969 S4_NUM_ID3_ORIG = 1978 S4_NAME2_ID5 = 1971 S4_NAME2_ID3 = 1976 S4_NUM2_ID5_ORIG = 1971 S4_NUM2_ID3_ORIG = 1976 S4_SQ2 = CGCUGU S4_SQLEN2 = 6 S4_SQ = GGCGCUGUCU S4_SQLEN = 10 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 20 H1_INID2 = 3 H1_OUTID2 = 18 H1_INID2_ORIG = 1723 H1_OUTID2_ORIG = 1699 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 68.66464180336307 H1_P_Y = 135.6783327675565 H1_P_Z = 167.57332896022336 # Orientation: H1_DX_X = -0.4518477427632206 H1_DX_Y = 0.5580172441579805 H1_DX_Z = 0.6960246925088995 H1_DY_X = 0.6739460426847614 H1_DY_Y = -0.2976659496014804 H1_DY_Z = 0.6761595329487022 H1_DZ_X = 0.5844915302289024 H1_DZ_Y = 0.7746042458379634 H1_DZ_Z = -0.24157382602524535 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1742 H2_OUTID2_ORIG = 1724 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 61.68212437456655 H2_P_Y = 133.75125551079896 H2_P_Z = 188.2651929235146 # Orientation: H2_DX_X = -0.8325492150238674 H2_DX_Y = -0.44114361735117313 H2_DX_Z = 0.33504345006804215 H2_DY_X = 0.447221184301398 H2_DY_Y = -0.17835817449454794 H2_DY_Z = 0.8764596818468249 H2_DZ_X = -0.3268868563818472 H2_DZ_Y = 0.8795343486534932 H2_DZ_Z = 0.3457807291673305 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 18 H3_INID2 = 3 H3_OUTID2 = 16 H3_INID2_ORIG = 1971 H3_OUTID2_ORIG = 1755 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 71.56080912540122 H3_P_Y = 131.08832657493483 H3_P_Z = 145.4739592416683 # Orientation: H3_DX_X = 0.4432612460186789 H3_DX_Y = 0.23104864575097395 H3_DX_Z = 0.8661039147091856 H3_DY_X = 0.8747525079217695 H3_DY_Y = -0.32251671264393167 H3_DY_Z = -0.36165041123976494 H3_DZ_X = 0.19577414962782314 H3_DZ_Y = 0.9179321834220389 H3_DZ_Z = -0.34506954223101616 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 10 H4_INID2 = 3 H4_OUTID2 = 8 H4_INID2_ORIG = 1684 H4_OUTID2_ORIG = 1976 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 60.04550123915399 H4_P_Y = 105.65421603094038 H4_P_Z = 151.69505695529193 # Orientation: H4_DX_X = 0.6120407770982723 H4_DX_Y = -0.02970599436596899 H4_DX_Z = -0.7902680817720409 H4_DY_X = 0.6632638266560704 H4_DY_Y = -0.5249316266541371 H4_DY_Z = 0.5334115517944724 H4_DZ_X = -0.4306822302097899 H4_DZ_Y = -0.8506258526737724 H4_DZ_Z = -0.3015766492030707 ############# END of Description of junction: j43