############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS12HS3HS4 FINGERPRINT = 28:69:78:86:102:103:126:154:155:169 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 113 S1_NAME_ID3 = 121 S1_NUM_ID5_ORIG = 113 S1_NUM_ID3_ORIG = 121 S1_NAME2_ID5 = 115 S1_NAME2_ID3 = 119 S1_NUM2_ID5_ORIG = 115 S1_NUM2_ID3_ORIG = 119 S1_SQ2 = GAAUG S1_SQLEN2 = 5 S1_SQ = CCGAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 45 S2_NAME_ID3 = 54 S2_NUM_ID5_ORIG = 45 S2_NUM_ID3_ORIG = 54 S2_NAME2_ID5 = 47 S2_NAME2_ID3 = 52 S2_NUM2_ID5_ORIG = 47 S2_NUM2_ID3_ORIG = 52 S2_SQ2 = GAUGAA S2_SQLEN2 = 6 S2_SQ = CCGAUGAAGG S2_SQLEN = 10 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 126 S3_NAME_ID3 = 131 S3_NUM_ID5_ORIG = 126 S3_NUM_ID3_ORIG = 131 S3_NAME2_ID5 = 128 S3_NAME2_ID3 = 129 S3_NUM2_ID5_ORIG = 128 S3_NUM2_ID3_ORIG = 129 S3_SQ2 = CA S3_SQLEN2 = 2 S3_SQ = CCCACC S3_SQLEN = 6 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 140 S4_NAME_ID3 = 146 S4_NUM_ID5_ORIG = 140 S4_NUM_ID3_ORIG = 146 S4_NAME2_ID5 = 142 S4_NAME2_ID3 = 144 S4_NUM2_ID5_ORIG = 142 S4_NUM2_ID3_ORIG = 144 S4_SQ2 = UAU S4_SQLEN2 = 3 S4_SQ = GGUAUCC S4_SQLEN = 7 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 151 S5_NAME_ID3 = 156 S5_NUM_ID5_ORIG = 151 S5_NUM_ID3_ORIG = 156 S5_NAME2_ID5 = 153 S5_NAME2_ID3 = 154 S5_NUM2_ID5_ORIG = 153 S5_NUM2_ID3_ORIG = 154 S5_SQ2 = AU S5_SQLEN2 = 2 S5_SQ = GGAUGG S5_SQLEN = 6 S5_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 10 H1_INID2 = 3 H1_OUTID2 = 8 H1_INID2_ORIG = 115 H1_OUTID2_ORIG = 52 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -1.368163543364969 H1_P_Y = 163.93572061826126 H1_P_Z = 123.84865934904035 # Orientation: H1_DX_X = 0.8267975158968943 H1_DX_Y = -0.550399061918398 H1_DX_Z = -0.11604628536099426 H1_DY_X = 0.2845017651221069 H1_DY_Y = 0.2312115974665403 H1_DY_Z = 0.9303762372499449 H1_DZ_X = -0.48524696119515687 H1_DZ_Y = -0.8022481348288295 H1_DZ_Z = 0.34775467906922586 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 128 H2_OUTID2_ORIG = 119 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 11.643429779280527 H2_P_Y = 172.1623091606223 H2_P_Z = 129.3484585355876 # Orientation: H2_DX_X = 0.7351161611550392 H2_DX_Y = 0.49593213953369286 H2_DX_Z = 0.46222888549530694 H2_DY_X = 0.12914930635568567 H2_DY_Y = -0.7717704249672579 H2_DY_Z = 0.6226482697428253 H2_DZ_X = 0.6655258719813322 H2_DZ_Y = -0.39802226586388656 H2_DZ_Z = -0.6313902039151742 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 3 H3_OUTID2 = 4 H3_INID2_ORIG = 142 H3_OUTID2_ORIG = 129 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = -0.023452816278696886 H3_P_Y = 184.32301232812776 H3_P_Z = 138.79811056972292 # Orientation: H3_DX_X = 0.5808683469018517 H3_DX_Y = 0.797112982028608 H3_DX_Z = -0.1649328877118137 H3_DY_X = -0.6228643702651262 H3_DY_Y = 0.30480839323476516 H3_DY_Z = -0.720508028871194 H3_DZ_X = -0.5240533749740837 H3_DZ_Y = 0.5212511269005518 H3_DZ_Z = 0.6735468230814945 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 7 H4_INID2 = 3 H4_OUTID2 = 5 H4_INID2_ORIG = 153 H4_OUTID2_ORIG = 144 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 8.754228943447828 H4_P_Y = 193.3334562611313 H4_P_Z = 116.45345968548197 # Orientation: H4_DX_X = 0.7136086715301655 H4_DX_Y = -0.1935307147846288 H4_DX_Z = -0.6732819070433322 H4_DY_X = -0.6671822277854496 H4_DY_Y = 0.10530645219097323 H4_DY_Z = -0.737413334605634 H4_DZ_X = 0.2136130586930669 H4_DZ_Y = 0.9754262727453522 H4_DZ_Z = -0.05397265598335821 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 6 H5_INID2 = 3 H5_OUTID2 = 4 H5_INID2_ORIG = 47 H5_OUTID2_ORIG = 154 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 10.516059612914454 H5_P_Y = 171.10184406681884 H5_P_Z = 103.56445896511403 # Orientation: H5_DX_X = -0.023635899296687413 H5_DX_Y = -0.3865422757512249 H5_DX_Z = 0.9219687702528176 H5_DY_X = -0.8067233243148397 H5_DY_Y = -0.5373121363060704 H5_DY_Z = -0.2459535447693355 H5_DZ_X = 0.590456452476257 H5_DZ_Y = -0.7495870444686545 H5_DZ_Z = -0.2991328141376499 ############# END of Description of junction: j2