############# Start of Description of junction: j15 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS5HS2 FINGERPRINT = 34:49:133:139:150:171 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1305 S1_NAME_ID3 = 1310 S1_NUM_ID5_ORIG = 1305 S1_NUM_ID3_ORIG = 1310 S1_NAME2_ID5 = 1307 S1_NAME2_ID3 = 1308 S1_NUM2_ID5_ORIG = 1307 S1_NUM2_ID3_ORIG = 1308 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CUUCGC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1281 S2_NAME_ID3 = 1291 S2_NUM_ID5_ORIG = 1281 S2_NUM_ID3_ORIG = 1291 S2_NAME2_ID5 = 1283 S2_NAME2_ID3 = 1289 S2_NUM2_ID5_ORIG = 1283 S2_NUM2_ID3_ORIG = 1289 S2_SQ2 = CGAUAAA S2_SQLEN2 = 7 S2_SQ = AACGAUAAAAG S2_SQLEN = 11 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1660 S3_NAME_ID3 = 1667 S3_NUM_ID5_ORIG = 1660 S3_NUM_ID3_ORIG = 1667 S3_NAME2_ID5 = 1662 S3_NAME2_ID3 = 1665 S3_NUM2_ID5_ORIG = 1662 S3_NUM2_ID3_ORIG = 1665 S3_SQ2 = GCGC S3_SQLEN2 = 4 S3_SQ = GCGCGCGA S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1990 S4_NAME_ID3 = 1995 S4_NUM_ID5_ORIG = 1990 S4_NUM_ID3_ORIG = 1995 S4_NAME2_ID5 = 1992 S4_NAME2_ID3 = 1993 S4_NUM2_ID5_ORIG = 1992 S4_NUM2_ID3_ORIG = 1993 S4_SQ2 = GG S4_SQLEN2 = 2 S4_SQ = UCGGUG S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 1307 H1_OUTID2_ORIG = 1289 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 14.220277838470246 H1_P_Y = 120.27352559415849 H1_P_Z = 162.10399406047907 # Orientation: H1_DX_X = 0.3430015363608998 H1_DX_Y = -0.788773137788624 H1_DX_Z = 0.5100851724537279 H1_DY_X = -0.5437870785251011 H1_DY_Y = 0.27604314957801535 H1_DY_Z = 0.7925249477462444 H1_DZ_X = -0.7659279073667413 H1_DZ_Y = -0.5492150004088785 H1_DZ_Z = -0.33424141580999844 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1662 H2_OUTID2_ORIG = 1308 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 28.707919969145745 H2_P_Y = 131.31457982548721 H2_P_Z = 168.6260156319426 # Orientation: H2_DX_X = 0.5318222523068847 H2_DX_Y = -0.5299736057440327 H2_DX_Z = -0.6605248437158764 H2_DY_X = -0.08192003513416779 H2_DY_Y = 0.7441198982683659 H2_DY_Z = -0.6630042871993282 H2_DZ_X = 0.8428844522203711 H2_DZ_Y = 0.406710651711677 H2_DZ_Z = 0.35232406388072945 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 1992 H3_OUTID2_ORIG = 1665 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 28.26445729831541 H3_P_Y = 110.49804511530067 H3_P_Z = 146.6769956247138 # Orientation: H3_DX_X = -0.6840772859050404 H3_DX_Y = -0.1435960337318818 H3_DX_Z = 0.7151352641320727 H3_DY_X = 0.0597461409994402 H3_DY_Y = -0.9881668374523116 H3_DY_Z = -0.14126818465305746 H3_DZ_X = 0.7269585033167019 H3_DZ_Y = -0.053911784017671494 H3_DZ_Z = 0.684561797064049 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 1283 H4_OUTID2_ORIG = 1993 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 20.22892213197396 H4_P_Y = 108.92907873309105 H4_P_Z = 134.7798230350428 # Orientation: H4_DX_X = -0.2856077331686713 H4_DX_Y = 0.9556914021946596 H4_DX_Z = -0.0712893156471921 H4_DY_X = 0.8968985524225026 H4_DY_Y = 0.24034632656568533 H4_DY_Z = -0.37122315386946525 H4_DZ_X = -0.3376406513094601 H4_DZ_Y = -0.1699634874835425 H4_DZ_Z = -0.9258030046968599 ############# END of Description of junction: j15