############# Start of Description of junction: j16 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS5HS2 FINGERPRINT = 34:49:133:138:151:170 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1305 S1_NAME_ID3 = 1310 S1_NUM_ID5_ORIG = 1305 S1_NUM_ID3_ORIG = 1310 S1_NAME2_ID5 = 1307 S1_NAME2_ID3 = 1308 S1_NUM2_ID5_ORIG = 1307 S1_NUM2_ID3_ORIG = 1308 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CUUCGC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1281 S2_NAME_ID3 = 1291 S2_NUM_ID5_ORIG = 1281 S2_NUM_ID3_ORIG = 1291 S2_NAME2_ID5 = 1283 S2_NAME2_ID3 = 1289 S2_NUM2_ID5_ORIG = 1283 S2_NUM2_ID3_ORIG = 1289 S2_SQ2 = CGAUAAA S2_SQLEN2 = 7 S2_SQ = AACGAUAAAAG S2_SQLEN = 11 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1660 S3_NAME_ID3 = 1667 S3_NUM_ID5_ORIG = 1660 S3_NUM_ID3_ORIG = 1667 S3_NAME2_ID5 = 1662 S3_NAME2_ID3 = 1665 S3_NUM2_ID5_ORIG = 1662 S3_NUM2_ID3_ORIG = 1665 S3_SQ2 = GCGC S3_SQLEN2 = 4 S3_SQ = GCGCGCGA S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1990 S4_NAME_ID3 = 1995 S4_NUM_ID5_ORIG = 1990 S4_NUM_ID3_ORIG = 1995 S4_NAME2_ID5 = 1992 S4_NAME2_ID3 = 1993 S4_NUM2_ID5_ORIG = 1992 S4_NUM2_ID3_ORIG = 1993 S4_SQ2 = GG S4_SQLEN2 = 2 S4_SQ = UCGGUG S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 1307 H1_OUTID2_ORIG = 1289 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 14.088796466989464 H1_P_Y = 120.5167861513317 H1_P_Z = 162.14837229027003 # Orientation: H1_DX_X = 0.35735087576907176 H1_DX_Y = -0.7966652872154611 H1_DX_Z = 0.4874677135287868 H1_DY_X = -0.551524578393618 H1_DY_Y = 0.2412127237096655 H1_DY_Z = 0.7985217976663535 H1_DZ_X = -0.7537380121864672 H1_DZ_Y = -0.5542028889012443 H1_DZ_Z = -0.3531829085880531 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1662 H2_OUTID2_ORIG = 1308 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 28.412781096964594 H2_P_Y = 131.23780201335697 H2_P_Z = 168.61587739170386 # Orientation: H2_DX_X = 0.5379828655450432 H2_DX_Y = -0.538070235284124 H2_DX_Z = -0.6488874003101444 H2_DY_X = -0.06049225640769862 H2_DY_Y = 0.7431484451437314 H2_DY_Z = -0.6663865810437244 H2_DZ_X = 0.8407824470662177 H2_DZ_Y = 0.39775722542995595 H2_DZ_Z = 0.36725204740562845 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 1992 H3_OUTID2_ORIG = 1665 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 28.199011599929623 H3_P_Y = 110.5052929514781 H3_P_Z = 146.90089091616284 # Orientation: H3_DX_X = -0.6955546220104161 H3_DX_Y = -0.14833719693658054 H3_DX_Z = 0.7029934877400876 H3_DY_X = 0.04819741468083549 H3_DY_Y = -0.9858841041334756 H3_DY_Z = -0.16034195469381984 H3_DZ_X = 0.7168547809828922 H3_DZ_Y = -0.07764411904294377 H3_DZ_Z = 0.6928857147899805 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 1283 H4_OUTID2_ORIG = 1993 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 20.171126533981305 H4_P_Y = 108.93473681705592 H4_P_Z = 134.62031532020723 # Orientation: H4_DX_X = -0.2747950628405036 H4_DX_Y = 0.9605916987950422 H4_DX_Z = -0.04184807814618807 H4_DY_X = 0.9000997301158655 H4_DY_Y = 0.24169816573059677 H4_DY_Z = -0.3624947896560968 H4_DZ_X = -0.33809488207281646 H4_DZ_Y = -0.13727922234814116 H4_DZ_Z = -0.9310457914773451 ############# END of Description of junction: j16