############# Start of Description of junction: k3 # Number of strands: NUM_STRANDS = 2 LILLEY = HS4HS9 FINGERPRINT = 58 LOOP_LENGTH_SUM = 13 KISSING_LOOP = TRUE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1465 S1_NAME_ID3 = 1477 S1_NUM_ID5_ORIG = 1465 S1_NUM_ID3_ORIG = 1477 S1_NAME2_ID5 = 1466 S1_NAME2_ID3 = 1476 S1_NUM2_ID5_ORIG = 1466 S1_NUM2_ID3_ORIG = 1476 S1_SQ2 = CUAUGGCUAUG S1_SQLEN2 = 11 S1_SQ = GCUAUGGCUAUGC S1_SQLEN = 13 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2679 S2_NAME_ID3 = 2686 S2_NUM_ID5_ORIG = 2679 S2_NUM_ID3_ORIG = 2686 S2_NAME2_ID5 = 2680 S2_NAME2_ID3 = 2685 S2_NUM2_ID5_ORIG = 2680 S2_NUM2_ID3_ORIG = 2685 S2_SQ2 = UACCAA S2_SQLEN2 = 6 S2_SQ = GUACCAAC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 13 H1_INID2 = 2 H1_OUTID2 = 12 H1_INID2_ORIG = 1466 H1_OUTID2_ORIG = 1476 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 23.175841851455775 H1_P_Y = 138.205480962595 H1_P_Z = 193.3950231435011 # Orientation: H1_DX_X = 0.6290566424498714 H1_DX_Y = -0.7229130663228602 H1_DX_Z = -0.2858048969653737 H1_DY_X = -0.7490049883788181 H1_DY_Y = -0.4652660294572968 H1_DY_Z = -0.47171924829999057 H1_DZ_X = 0.2080366986215303 H1_DZ_Y = 0.5108074200447277 H1_DZ_Z = -0.8341441791764339 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 2 H2_OUTID2 = 7 H2_INID2_ORIG = 2680 H2_OUTID2_ORIG = 2685 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 39.8876331326793 H2_P_Y = 124.04168187415243 H2_P_Z = 179.8923341180964 # Orientation: H2_DX_X = -0.36144896375660807 H2_DX_Y = -0.9013191957573099 H2_DX_Z = 0.23870139077655494 H2_DY_X = -0.7813235127452813 H2_DY_Y = 0.15308651563391606 H2_DY_Z = -0.6050603995986137 H2_DZ_X = 0.508810588559875 H2_DZ_Y = -0.4052014635838077 H2_DZ_Z = -0.7595548425748575 ############# END of Description of junction: k3