############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 141 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 40.08580115483379 H1_P_Y = 129.4168821861424 H1_P_Z = 14.58975334303195 # Orientation: H1_DX_X = 0.09905935512615116 H1_DX_Y = -0.7926996689155885 H1_DX_Z = 0.6015101653863315 H1_DY_X = 0.609403292891237 H1_DY_Y = 0.5261930722650732 H1_DY_Z = 0.593083870387284 H1_DZ_X = -0.7866478696184842 H1_DZ_Y = 0.30781176975770563 H1_DZ_Z = 0.5351981349213855 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 61.16422172855767 H2_P_Y = 120.08193947840294 H2_P_Z = 2.0325713648570973 # Orientation: H2_DX_X = -0.9267114124575357 H2_DX_Y = -0.3755959255038164 H2_DX_Z = 0.011561088439184353 H2_DY_X = -0.22809215893547474 H2_DY_Y = 0.5377912444217827 H2_DY_Z = -0.8116369536039023 H2_DZ_X = 0.2986300806233757 H2_DZ_Y = -0.7547902212987339 H2_DZ_Z = -0.5840477692609394 ############# END of Description of junction: j4