#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 3
LILLEY = HS1HS4HS5
FINGERPRINT = 54:124:175
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  321
S1_NAME_ID3 = 325
S1_NUM_ID5_ORIG =  321
S1_NUM_ID3_ORIG = 325
S1_NAME2_ID5 =  322
S1_NAME2_ID3 = 324
S1_NUM2_ID5_ORIG =  322
S1_NUM2_ID3_ORIG = 324
S1_SQ2 = GCG
S1_SQLEN2 = 3
S1_SQ = AGCGU
S1_SQLEN = 5
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  303
S2_NAME_ID3 = 310
S2_NUM_ID5_ORIG =  303
S2_NUM_ID3_ORIG = 310
S2_NAME2_ID5 =  304
S2_NAME2_ID3 = 309
S2_NUM2_ID5_ORIG =  304
S2_NUM2_ID3_ORIG = 309
S2_SQ2 = GAAGUC
S2_SQLEN2 = 6
S2_SQ = CGAAGUCU
S2_SQLEN = 8
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  340
S3_NAME_ID3 = 348
S3_NUM_ID5_ORIG =  340
S3_NUM_ID3_ORIG = 348
S3_NAME2_ID5 =  341
S3_NAME2_ID3 = 347
S3_NUM2_ID5_ORIG =  341
S3_NUM2_ID3_ORIG = 347
S3_SQ2 = CCCCGUA
S3_SQLEN2 = 7
S3_SQ = ACCCCGUAC
S3_SQLEN = 9
S3_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 2
H1_OUTID2 = 7
H1_INID2_ORIG = 322
H1_OUTID2_ORIG = 309
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 4.415421933165355
H1_P_Y = 140.9175987413488
H1_P_Z = 40.03309642424222
# Orientation:
H1_DX_X = -0.7605903180095313
H1_DX_Y = 0.47570589235147054
H1_DX_Z = -0.44182153878263364
H1_DY_X = -0.642643416060682
H1_DY_Y = -0.45493762549563144
H1_DY_Z = 0.6164748143292371
H1_DZ_X = 0.0922594599161144
H1_DZ_Y = 0.752818478047999
H1_DZ_Z = 0.6517304129511459
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 341
H2_OUTID2_ORIG = 324
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 5.991169414440872
H2_P_Y = 128.20856160453442
H2_P_Z = 31.397327595154376
# Orientation:
H2_DX_X = -0.23571376586864723
H2_DX_Y = 0.5834783756518505
H2_DX_Z = -0.7771692259261762
H2_DY_X = 0.9710950423163824
H2_DY_Y = 0.11047851978111112
H2_DY_Z = -0.2115866618090685
H2_DZ_X = -0.03759573604218591
H2_DZ_Y = -0.8045790712003509
H2_DZ_Z = -0.592654265839542
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 304
H3_OUTID2_ORIG = 347
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 31.068476996086474
H3_P_Y = 133.4322717326824
H3_P_Z = 21.4616417868394
# Orientation:
H3_DX_X = -0.6003636129588266
H3_DX_Y = -0.7248781654816696
H3_DX_Z = -0.337809380335937
H3_DY_X = -0.29185598536559
H3_DY_Y = 0.5918653251184196
H3_DY_Z = -0.75134247898594
H3_DZ_X = 0.7445694165363648
H3_DZ_Y = -0.35248699568975894
H3_DZ_Z = -0.5668944362298056
#############  END of Description of junction: j9