#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 8:75:77:79:85:137
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 45.94190596095336
H1_P_Y = 127.46602473845354
H1_P_Z = 37.31098733169872
# Orientation:
H1_DX_X = -0.1860633435413419
H1_DX_Y = -0.9298678990914766
H1_DX_Z = 0.3173737897644102
H1_DY_X = -0.5720901997376728
H1_DY_Y = -0.16008271822525444
H1_DY_Z = -0.8044167618155029
H1_DZ_X = 0.7988073832622788
H1_DZ_Y = -0.33123890708191084
H1_DZ_Z = -0.5021827863247097
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.92286332298547
H2_P_Y = 144.4170994054771
H2_P_Z = 56.04039795001889
# Orientation:
H2_DX_X = -0.6543415609141476
H2_DX_Y = 0.41074826521534646
H2_DX_Z = 0.6349196675824444
H2_DY_X = 0.24292914025469514
H2_DY_Y = -0.6809357515184047
H2_DY_Z = 0.6908776556809286
H2_DZ_X = 0.7161162995460657
H2_DZ_Y = 0.6063104525955794
H2_DZ_Z = 0.34578183960093156
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 25.775425833795644
H3_P_Y = 171.8018805289429
H3_P_Z = 66.33635729642056
# Orientation:
H3_DX_X = -0.7051591365267846
H3_DX_Y = 0.6930843978301482
H3_DX_Z = -0.14961487110987548
H3_DY_X = -0.3439406070183679
H3_DY_Y = -0.1498314134367149
H3_DY_Z = 0.9269603046470678
H3_DZ_X = 0.6200447169492129
H3_DZ_Y = 0.7051131576080536
H3_DZ_Z = 0.34403485862829086
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 28.225326773185248
H4_P_Y = 141.8072486000704
H4_P_Z = 69.47599449325766
# Orientation:
H4_DX_X = -0.7705733680688915
H4_DX_Y = -0.6251251069665784
H4_DX_Z = -0.12423882268841169
H4_DY_X = 0.579441756346224
H4_DY_Y = -0.7683069495540167
H4_DY_Z = 0.2719405859179602
H4_DZ_X = -0.26545043873643337
H4_DZ_Y = 0.13756101158045908
H4_DZ_Z = 0.9542604637453991
#############  END of Description of junction: j1