#############  Start of Description of junction: j42
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS7HS8HS8HS9HS11
FINGERPRINT = 19:27:28:45:111:129:131:150:156:171
LOOP_LENGTH_SUM = 43
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2479
S1_NAME_ID3 = 2492
S1_NUM_ID5_ORIG =  2479
S1_NUM_ID3_ORIG = 2492
S1_NAME2_ID5 =  2481
S1_NAME2_ID3 = 2490
S1_NUM2_ID5_ORIG =  2481
S1_NUM2_ID3_ORIG = 2490
S1_SQ2 = GGAUAACAGA
S1_SQLEN2 = 10
S1_SQ = AGGGAUAACAGAGU
S1_SQLEN = 14
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  2093
S2_NAME_ID3 = 2107
S2_NUM_ID5_ORIG =  2093
S2_NUM_ID3_ORIG = 2107
S2_NAME2_ID5 =  2095
S2_NAME2_ID3 = 2105
S2_NUM2_ID5_ORIG =  2095
S2_NUM2_ID3_ORIG = 2105
S2_SQ2 = AAGCGAAGACC
S2_SQLEN2 = 11
S2_SQ = GGAAGCGAAGACCCU
S2_SQLEN = 15
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  2529
S3_NAME_ID3 = 2545
S3_NUM_ID5_ORIG =  2529
S3_NUM_ID3_ORIG = 2545
S3_NAME2_ID5 =  2531
S3_NAME2_ID3 = 2543
S3_NUM2_ID5_ORIG =  2531
S3_NUM2_ID3_ORIG = 2543
S3_SQ2 = UACCUCGAUGUCG
S3_SQLEN2 = 13
S3_SQ = GCUACCUCGAUGUCGGU
S3_SQLEN = 17
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  2613
S4_NAME_ID3 = 2625
S4_NUM_ID5_ORIG =  2613
S4_NUM_ID3_ORIG = 2625
S4_NAME2_ID5 =  2615
S4_NAME2_ID3 = 2623
S4_NUM2_ID5_ORIG =  2615
S4_NUM2_ID3_ORIG = 2623
S4_SQ2 = UGGGUUUAG
S4_SQLEN2 = 9
S4_SQ = GCUGGGUUUAGAC
S4_SQLEN = 13
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  2639
S5_NAME_ID3 = 2652
S5_NUM_ID5_ORIG =  2639
S5_NUM_ID3_ORIG = 2652
S5_NAME2_ID5 =  2641
S5_NAME2_ID3 = 2650
S5_NUM2_ID5_ORIG =  2641
S5_NUM2_ID3_ORIG = 2650
S5_SQ2 = CGGCUGCUAU
S5_SQLEN2 = 10
S5_SQ = GUCGGCUGCUAUCU
S5_SQLEN = 14
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 15
H1_INID2 = 3
H1_OUTID2 = 13
H1_INID2_ORIG = 2481
H1_OUTID2_ORIG = 2105
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 71.7694866749019
H1_P_Y = 113.58259082108155
H1_P_Z = 83.22131486805597
# Orientation:
H1_DX_X = -0.39218229316304587
H1_DX_Y = -0.8825405964746125
H1_DX_Z = 0.25945162266518196
H1_DY_X = -0.6773954349823441
H1_DY_Y = 0.08625260368806664
H1_DY_Z = -0.7305449425066968
H1_DZ_X = 0.6223571913254062
H1_DZ_Y = -0.4622581356030935
H1_DZ_Z = -0.6316557151441771
## Properties of helix 2
H2_INID = 1
H2_OUTID = 14
H2_INID2 = 3
H2_OUTID2 = 12
H2_INID2_ORIG = 2531
H2_OUTID2_ORIG = 2490
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 64.16954584269598
H2_P_Y = 109.23766107486001
H2_P_Z = 115.33298190718406
# Orientation:
H2_DX_X = -0.5803684184090727
H2_DX_Y = -0.8103972144713367
H2_DX_Z = -0.08018013276651459
H2_DY_X = 0.8133014749632821
H2_DY_Y = -0.5818063324234259
H2_DY_Z = -0.006488634260449544
H2_DZ_X = -0.04139093784770864
H2_DZ_Y = -0.06897641864512138
H2_DZ_Z = 0.9967592708046311
## Properties of helix 3
H3_INID = 1
H3_OUTID = 17
H3_INID2 = 3
H3_OUTID2 = 15
H3_INID2_ORIG = 2615
H3_OUTID2_ORIG = 2543
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 64.98161299137519
H3_P_Y = 131.04646630710647
H3_P_Z = 114.4663965282168
# Orientation:
H3_DX_X = 0.7306849557493109
H3_DX_Y = 0.5501607192366578
H3_DX_Z = 0.4042557092369208
H3_DY_X = -0.46695098214752306
H3_DY_Y = 0.8346975950661033
H3_DY_Z = -0.29195325835199526
H3_DZ_X = -0.4980524828902162
H3_DZ_Y = 0.024558253192878965
H3_DZ_Z = 0.8667990635014604
## Properties of helix 4
H4_INID = 1
H4_OUTID = 13
H4_INID2 = 3
H4_OUTID2 = 11
H4_INID2_ORIG = 2641
H4_OUTID2_ORIG = 2623
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 91.70729635815017
H4_P_Y = 119.81885495062674
H4_P_Z = 94.72933478618388
# Orientation:
H4_DX_X = 0.7027083312681413
H4_DX_Y = 0.7059756817988614
H4_DX_Z = -0.08831386003886621
H4_DY_X = 0.32635731901015674
H4_DY_Y = -0.20954355569378436
H4_DY_Z = 0.9217279417462123
H4_DZ_X = 0.632211911857766
H4_DZ_Y = -0.6765277784214305
H4_DZ_Z = -0.37764833314781754
## Properties of helix 5
H5_INID = 1
H5_OUTID = 14
H5_INID2 = 3
H5_OUTID2 = 12
H5_INID2_ORIG = 2095
H5_OUTID2_ORIG = 2650
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 48.86107111121054
H5_P_Y = 141.41639310439663
H5_P_Z = 107.58483312951807
# Orientation:
H5_DX_X = -0.7441414783066378
H5_DX_Y = -0.6630673666803375
H5_DX_Z = -0.08121039038942968
H5_DY_X = 0.439268834527752
H5_DY_Y = -0.5772823746172264
H5_DY_Z = 0.6883225631700043
H5_DZ_X = -0.5032855563953831
H5_DZ_Y = 0.476536176171237
H5_DZ_Z = 0.7208445890231019
#############  END of Description of junction: j42