############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS4 FINGERPRINT = 156 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1482 S1_NAME_ID3 = 1491 S1_NUM_ID5_ORIG = 1482 S1_NUM_ID3_ORIG = 1491 S1_NAME2_ID5 = 1484 S1_NAME2_ID3 = 1489 S1_NUM2_ID5_ORIG = 1484 S1_NUM2_ID3_ORIG = 1489 S1_SQ2 = GAAAUG S1_SQLEN2 = 6 S1_SQ = ACGAAAUGGG S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1454 S2_NAME_ID3 = 1461 S2_NUM_ID5_ORIG = 1454 S2_NUM_ID3_ORIG = 1461 S2_NAME2_ID5 = 1456 S2_NAME2_ID3 = 1459 S2_NUM2_ID5_ORIG = 1456 S2_NUM2_ID3_ORIG = 1459 S2_SQ2 = CUAA S2_SQLEN2 = 4 S2_SQ = UCCUAAGU S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 1484 H1_OUTID2_ORIG = 1459 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 96.96819239260532 H1_P_Y = 145.59776415332166 H1_P_Z = 45.701365522709324 # Orientation: H1_DX_X = -0.7477128958973793 H1_DX_Y = 0.01591136501821211 H1_DX_Z = 0.6638314950136177 H1_DY_X = -0.6084558827520397 H1_DY_Y = 0.38391747186739167 H1_DY_Z = -0.6945421610956117 H1_DZ_X = -0.2659076231573181 H1_DZ_Y = -0.9232303088927551 H1_DZ_Z = -0.27737868102762064 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 1456 H2_OUTID2_ORIG = 1489 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 91.53603803221391 H2_P_Y = 168.17611126168552 H2_P_Z = 54.5892012842597 # Orientation: H2_DX_X = 0.9214963315536409 H2_DX_Y = 0.16719490395161074 H2_DX_Z = -0.35055723502131997 H2_DY_X = -0.3694744892539319 H2_DY_Y = 0.09914640600098323 H2_DY_Z = -0.9239364653306126 H2_DZ_X = -0.11972097862832243 H2_DZ_Y = 0.9809260187545874 H2_DZ_Z = 0.15313730116002944 ############# END of Description of junction: j28