############# Start of Description of junction: j39 # Number of strands: NUM_STRANDS = 2 LILLEY = HS4HS5 FINGERPRINT = 39 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1114 S1_NAME_ID3 = 1122 S1_NUM_ID5_ORIG = 1114 S1_NUM_ID3_ORIG = 1122 S1_NAME2_ID5 = 1115 S1_NAME2_ID3 = 1121 S1_NUM2_ID5_ORIG = 1115 S1_NUM2_ID3_ORIG = 1121 S1_SQ2 = UUAAGUG S1_SQLEN2 = 7 S1_SQ = AUUAAGUGU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1242 S2_NAME_ID3 = 1249 S2_NUM_ID5_ORIG = 1242 S2_NUM_ID3_ORIG = 1249 S2_NAME2_ID5 = 1243 S2_NAME2_ID3 = 1248 S2_NUM2_ID5_ORIG = 1243 S2_NUM2_ID3_ORIG = 1248 S2_SQ2 = CUCAAA S2_SQLEN2 = 6 S2_SQ = ACUCAAAU S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 1115 H1_OUTID2_ORIG = 1248 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 22.541315009193415 H1_P_Y = 96.95077636067342 H1_P_Z = 134.00063980733023 # Orientation: H1_DX_X = 0.9458507787184445 H1_DX_Y = 0.020326956390249507 H1_DX_Z = -0.32396468826340197 H1_DY_X = 0.1558551983875418 H1_DY_Y = -0.9039077505545521 H1_DY_Z = 0.3983213973953639 H1_DZ_X = -0.28473753095313015 H1_DZ_Y = -0.4272441846664776 H1_DZ_Z = -0.8581299115724903 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 2 H2_OUTID2 = 8 H2_INID2_ORIG = 1243 H2_OUTID2_ORIG = 1121 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 36.45125965698793 H2_P_Y = 111.58571975059947 H2_P_Z = 128.57470485161068 # Orientation: H2_DX_X = -0.4510069515093207 H2_DX_Y = -0.8847983904297649 H2_DX_Z = -0.11715177328218829 H2_DY_X = -0.8732318206118208 H2_DY_Y = 0.46458342938423414 H2_DY_Z = -0.14706605526953354 H2_DZ_X = 0.18455058157922366 H2_DZ_Y = 0.03597284301349646 H2_DZ_Z = -0.9821644655577302 ############# END of Description of junction: j39