#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:75:78:78:85:137
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 45.77980607886394
H1_P_Y = 126.9192313926559
H1_P_Z = 37.428677734192995
# Orientation:
H1_DX_X = -0.19760312355279552
H1_DX_Y = -0.9355807636874118
H1_DX_Z = 0.2926459297175441
H1_DY_X = -0.5760036949025036
H1_DY_Y = -0.13074523724581866
H1_DY_Z = -0.806923432796566
H1_DZ_X = 0.7932041030030277
H1_DZ_Y = -0.32801572760402564
H1_DZ_Z = -0.5130623094942308
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.77107045613291
H2_P_Y = 144.10295881425634
H2_P_Z = 56.44638837300676
# Orientation:
H2_DX_X = -0.6442090055020415
H2_DX_Y = 0.42868299326315196
H2_DX_Z = 0.633423751146907
H2_DY_X = 0.24215453186283042
H2_DY_Y = -0.6712498960362154
H2_DY_Z = 0.7005603184377946
H2_DZ_X = 0.725503921373523
H2_DZ_Y = 0.604693697964791
H2_DZ_Z = 0.3286176984176379
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 25.76329034820627
H3_P_Y = 171.56266294158758
H3_P_Z = 66.48656373940855
# Orientation:
H3_DX_X = -0.7119552080677103
H3_DX_Y = 0.6868777155753776
H3_DX_Z = -0.14600953924727378
H3_DY_X = -0.3344535142712921
H3_DY_Y = -0.14885029186930865
H3_DY_Z = 0.9305828482204106
H3_DZ_X = 0.6174630584066101
H3_DZ_Y = 0.711366708847379
H3_DZ_Z = 0.33570340636757123
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 27.95676829966252
H4_P_Y = 141.71623567446107
H4_P_Z = 69.4176994320964
# Orientation:
H4_DX_X = -0.7561984868356753
H4_DX_Y = -0.6442595468930392
H4_DX_Z = -0.11442676585748757
H4_DY_X = 0.6025706938299003
H4_DY_Y = -0.7538112552749681
H4_DY_Z = 0.26206325640596617
H4_DZ_X = -0.2550929388375245
H4_DZ_Y = 0.12922162225396505
H4_DZ_Z = 0.9582428527765217
#############  END of Description of junction: j1