############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS3 FINGERPRINT = 90 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 279 S1_NAME_ID3 = 287 S1_NUM_ID5_ORIG = 279 S1_NUM_ID3_ORIG = 287 S1_NAME2_ID5 = 281 S1_NAME2_ID3 = 285 S1_NUM2_ID5_ORIG = 281 S1_NUM2_ID3_ORIG = 285 S1_SQ2 = UCUCA S1_SQLEN2 = 5 S1_SQ = CCUCUCAUC S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 365 S2_NAME_ID3 = 370 S2_NUM_ID5_ORIG = 365 S2_NUM_ID3_ORIG = 370 S2_NAME2_ID5 = 367 S2_NAME2_ID3 = 368 S2_NUM2_ID5_ORIG = 367 S2_NUM2_ID3_ORIG = 368 S2_SQ2 = GC S2_SQLEN2 = 2 S2_SQ = GUGCGG S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 281 H1_OUTID2_ORIG = 368 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 80.0926834891426 H1_P_Y = 97.71637413644639 H1_P_Z = -8.447555521249162 # Orientation: H1_DX_X = -0.8412064800591565 H1_DX_Y = -0.5030424108527001 H1_DX_Z = 0.1982926897038748 H1_DY_X = 0.27375591387938414 H1_DY_Y = -0.7124691324456052 H1_DY_Z = -0.6461001740661168 H1_DZ_X = 0.4662932098181898 H1_DZ_Y = -0.4892198567062849 H1_DZ_Z = 0.7370444859584317 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 367 H2_OUTID2_ORIG = 285 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 62.68388407855584 H2_P_Y = 114.99612923127226 H2_P_Z = -2.8474075818105935 # Orientation: H2_DX_X = 0.853863455718141 H2_DX_Y = -0.13847667795707252 H2_DX_Z = 0.501738386662864 H2_DY_X = 0.45127582756164486 H2_DY_Y = 0.6772900631264775 H2_DY_Z = -0.5810579126461315 H2_DZ_X = -0.2593594541319604 H2_DZ_Y = 0.7225665229251206 H2_DZ_Z = 0.6408044112677995 ############# END of Description of junction: j3