############# Start of Description of junction: j53 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 14:26:150:153:168:176 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1827 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1827 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1828 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1828 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = GGACUGU S2_SQLEN = 7 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2021 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2021 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2020 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2020 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = UUAACC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 96.91897624520831 H1_P_Y = 140.18307488030916 H1_P_Z = 92.51299290209596 # Orientation: H1_DX_X = -0.02686913335409713 H1_DX_Y = 0.241830547554315 H1_DX_Z = -0.9699464087991458 H1_DY_X = -0.38312391149334246 H1_DY_Y = -0.8986956843845633 H1_DY_Z = -0.21345288780099736 H1_DZ_X = -0.9233060804060784 H1_DZ_Y = 0.36587436797091755 H1_DZ_Z = 0.11679823948605872 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 111.04235694538745 H2_P_Y = 130.80445343697468 H2_P_Z = 78.78002554708988 # Orientation: H2_DX_X = 0.6396211419470035 H2_DX_Y = 0.5831889596173312 H2_DX_Z = 0.5007748317905367 H2_DY_X = 0.1908791846505551 H2_DY_Y = -0.751560506792174 H2_DY_Z = 0.6314443296898276 H2_DZ_X = 0.744613948057335 H2_DZ_Y = -0.30829765164648393 H2_DZ_Z = -0.5920326227056449 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 113.49684995451953 H3_P_Y = 129.79785540414693 H3_P_Z = 94.2125691848111 # Orientation: H3_DX_X = 0.5136469242268475 H3_DX_Y = 0.8393101221055588 H3_DX_Z = -0.1781161311152033 H3_DY_X = 0.5110459963286615 H3_DY_Y = -0.13252246010725344 H3_DY_Z = 0.8492760371066481 H3_DZ_X = 0.6892015865251153 H3_DZ_Y = -0.5272535599673915 H3_DZ_Z = -0.49699583160523275 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1828 H4_OUTID2_ORIG = 2020 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 104.39495341370419 H4_P_Y = 140.2484149719393 H4_P_Z = 104.74215020331663 # Orientation: H4_DX_X = -0.359523286720588 H4_DX_Y = 0.4738867630630068 H4_DX_Z = -0.8038497011875307 H4_DY_X = -0.5329058745999902 H4_DY_Y = -0.8114230479440891 H4_DY_Z = -0.2400082625284483 H4_DZ_X = -0.7659989132645251 H4_DZ_Y = 0.34208766867394047 H4_DZ_Z = 0.5442625210491485 ############# END of Description of junction: j53